Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1571 ATGGTGACTCAACCCACACTGTGCCTTGCTTTCTCTGAACGCCGCTTCGTGTTCTTCAATACTTCCTCGGCTGCATCTAGGGTTTCTGAGTCTGCTTCGATGGGGAAGGGGACAGGGAGCTTTGGTAAGAGGAGAAACAAGACCCATACTCTCTGTGTGAGGTGTGGTCGTCGCAGCTTTCACCTCCAGAAGAGTCGCTGCTCAGCATGTGCTTTTCCTGCTGCTCGCAAGAGGAAATATAACTGGAGTGTGAAGGCAATCCGTAGAAAGACCACAGGAACTGGTAGGATGAGGTACTTGCGTAATGTGCCTCGCAGATTCAAGAGCGGTTTCAGAGAAGGTACTCAAGCCGCACCCAGGAAGAAGGGAGCAGCTGCGACTGCCTAA 387 0.522 MVTQPTLCLAFSERRFVFFNTSSAASRVSESASMGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTQAAPRKKGAAATA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1571 128 Pfam Ribosomal protein L37e 36 86 IPR001569 GO:0003735|GO:0005840|GO:0006412
Dere12g1571 128 PANTHER 60S RIBOSOMAL PROTEIN L37 34 127 - -
Dere12g1571 128 Gene3D - 34 120 IPR011331 GO:0003735|GO:0005840|GO:0006412
Dere12g1571 128 ProSitePatterns Ribosomal protein L37e signature. 37 56 IPR018267 GO:0003735|GO:0005840|GO:0006412
Dere12g1571 128 SUPERFAMILY Zn-binding ribosomal proteins 34 88 IPR011332 GO:0006412
Dere12g1571 128 Hamap 50S ribosomal protein L37e [rpl37e]. 35 86 IPR001569 GO:0003735|GO:0005840|GO:0006412
Dere12g1571 128 MobiDBLite consensus disorder prediction 108 128 - -
Dere12g1571 128 FunFam Ribosomal protein L37 34 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1571 Dere-ChrDere12 28221599 28222507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1571 34 128 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 87.368 2.12e-58 174