Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1544 ATGATGATGATGATGAAGCTTTCCGCCTTTCCGCGGGACTACGGACTACCGACGATTTCAGACTTGAAGGATCAGAATGGGGCTGCCGAGTCAGTAGAGGAAGAAACAGGTCAAAACGCGAGCGTTCGAGGGTTTGATCTGATTGATGAGATGAAGGAAAAACTCGAAGGAGCATGCCCTTCAAGAATGTCGTGTGCTGATATCATAACGCTTGCCACTAGAGACACCGTGGGCTCTGTCAGGAAGACCCAAATACGAGGTTACCACAGGGAGGCGACATGGGCTTGCCTGTGA 294 0.5068 MMMMMKLSAFPRDYGLPTISDLKDQNGAAESVEEETGQNASVRGFDLIDEMKEKLEGACPSRMSCADIITLATRDTVGSVRKTQIRGYHREATWACL 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1544 97 Gene3D - 19 95 - -
Dere12g1544 97 SUPERFAMILY Heme-dependent peroxidases 27 79 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere12g1544 97 PRINTS Plant peroxidase signature 43 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere12g1544 97 PRINTS Plant peroxidase signature 62 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere12g1544 97 ProSiteProfiles Plant heme peroxidase family profile. 20 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere12g1544 97 PANTHER PEROXIDASE 25-RELATED 31 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere12g1544 97 Pfam Peroxidase 32 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1544 Dere-ChrDere12 27946033 27947298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1544 33 78 Peroxidase AT4G26010 65.217 1.69e-15 68.2