Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1505 ATGCCTTACCAATATTGTGTTTTTCTTCACTTTGATGAAATTCAAAACCTTCCTCCTGGCCATAAGAGAATCATCAACGTCTCTTTCGGTGATAATGAATCTTCTTCTCAGCCTCTTGAATACTTGAAGTCTCTAACCATAAGTCCCAAGAACCCAATGCAAGGTTATGTTACTTTCACAGTCAAAGCAGCTGCTGAATGTGATGCTCCCCCAATCCTCAATGCCTTCGAGATTTACAGATTAACTCCACAACCAAATGCACATACAAATGGACAAGACGACTCTATGCATTCAAATATTGATCCTCAGCATGTGGTTAGAAATTTTGATATCATTAACAAGACTAATCTTGTTTATAGGGATCTGTCAAACAATGCATTGACTGGACACATACCAGAATTTCTTGCTGATCTTCCCATTTTAAAATTCCTCATTTTGACAGGAAACAAACTCACAGGTTCAATTCCGAAGGCTCTAAGGGAAAAGACTGATTTACAACTGAGAAACCCAAATGTTCTGAAGTGGAATGAGAGACTTCAAATTGCAACGGATGCAGCAAAAGCTCAAACGCTCCAAAGAAGCTCTTGCTGCAAGCTAGAGAAAGCTGGAAAGATGAATATCTATGGCAGAGAAGCACTTGTTCTGCTCTCAGCGTTGTTCTTCCTGACAAGAGGGAATGCACAGGATACCCTTGTGCCTGCAATCATAACATTTGGTGATTCTGCAGTAGATGTGGGGAATAATGACTATTTGCCCACAATCTTCAAGGCAGATTACCCTCCTTATGGAAGAGACTTTGTCAATCAACAACCCACAGGAAGATTTTGCAACGGAAAATTAGCTACTGATATTACTGCTGAAACACTGGGATTTAAGAGTTATGCACCTGCATATCTTAGCCCACAGGCATCGGGAAAGAACCTTCTTATTGGAGCAAATTTTGCTTCAGCTGCCTCTGGTTATGATGAGAAAGCTGCTATTTTGAATCATGCGATCCCATTGTCTCAACAATTAAACTATTACAAGGAATACCAAAGCAAGCTGGCCAAGGTTGCTGGCAGTCAAAAAGCAGCATCAATTATCAAGGATGCATTGTACATACTGAGTGCTGGAAGTAGTGACTTTGTGCAAAATTACTATGTCAATCCTTGGATCAACAAAGCCTTCACTCCAGATCAGTATTCCTCATACCTTCTAGGATCATTCTCAAGCTTTATTAAGGACTTGTATGGATTGGGAGCTAGAAAAATTGGAGTGACTTCACTTCCTCCGTTGGGTTGCCTACCTGCTGCAAGAACTTTGTTTGGATTTCATGAGGATGGATGTGTCTCAAGGATCAATACCGACGCACAAGCATTTAACAAAAAGATCAGCTCTGCTGCAGCAAATCTCCAAAAGCAACTTCGTGGTCTCAAGATAGTTATCTTTGATATTTACAAGCCCCTCTATGACCTTGTTCAATCGCCTTCAAAAAGTGGTTTTGTGGAGGCAAGGAGAGGTTGCTGCGGGACTGGAACTGTGGAGACAACATCGTTATTGTGCAATCCAAAATCACCAGGAACTTGTTCTAATGCTACCCAGTATGTGTTTTGGGACAGTGTCCATCCTTCTCAAGCTGCTAACCAGGTTCTAGCTGATGCCTTGATTGCACAAGGCATAGCCCTCATCTCATAA 1674 0.414 MPYQYCVFLHFDEIQNLPPGHKRIINVSFGDNESSSQPLEYLKSLTISPKNPMQGYVTFTVKAAAECDAPPILNAFEIYRLTPQPNAHTNGQDDSMHSNIDPQHVVRNFDIINKTNLVYRDLSNNALTGHIPEFLADLPILKFLILTGNKLTGSIPKALREKTDLQLRNPNVLKWNERLQIATDAAKAQTLQRSSCCKLEKAGKMNIYGREALVLLSALFFLTRGNAQDTLVPAIITFGDSAVDVGNNDYLPTIFKADYPPYGRDFVNQQPTGRFCNGKLATDITAETLGFKSYAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLNYYKEYQSKLAKVAGSQKAASIIKDALYILSAGSSDFVQNYYVNPWINKAFTPDQYSSYLLGSFSSFIKDLYGLGARKIGVTSLPPLGCLPAARTLFGFHEDGCVSRINTDAQAFNKKISSAAANLQKQLRGLKIVIFDIYKPLYDLVQSPSKSGFVEARRGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALIAQGIALIS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1505 557 PANTHER GDSL ESTERASE/LIPASE EXL3 218 548 - -
Dere12g1505 557 SUPERFAMILY L domain-like 111 165 - -
Dere12g1505 557 SUPERFAMILY SGNH hydrolase 235 549 - -
Dere12g1505 557 Pfam GDSL-like Lipase/Acylhydrolase 235 547 IPR001087 GO:0016788
Dere12g1505 557 Gene3D Ribonuclease Inhibitor 87 175 IPR032675 -
Dere12g1505 557 Gene3D SGNH hydrolase 223 553 IPR036514 -
Dere12g1505 557 FunFam GDSL esterase/lipase APG 224 553 - -
Dere12g1505 557 CDD SGNH_plant_lipase_like 233 549 IPR035669 -
Dere12g1505 557 Pfam Malectin-like domain 3 80 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1505 Dere-ChrDere12 27513743 27523818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1505 212 549 Pollen Coat Proteome AT1G75910 35.191 7.70e-62 205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1505 12 27513743 27523818 Dere12g1505 12 27513743 27523818 ECH