Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1501 ATGCATACGCCACAGAAGCTGGCGAATATTCAAGGCTTGTCAGCAGCTAGCAAGTCAAGTCAAGTAGCATTGTTCCAAAACAACCTGCGTCCTTCCGATCACATGGAGATGGCAACACAGTGGATTCTATCGTTAAGCTTACGGCTCGCCTTCATCCAACTTTCCCTTAATCATGGCAACCCAAAGCTAGTTGGAAGGAAACTCACCAACTACGACCCCAATCCTGGTTTCATAAGCATCGACTGTGGATCGGCACATGATTACTTGTACGAGGAAACTGGTATCCGGTATCAGACAGACACAAATTTTGTAGAAACTGGTACAAATTCTGAAGTTCACCCTAGCGTGAACTTGGAATATCCTTATTTTGGGGGACTATTGAACACGCTGAGGAGCTTCCCAGATGGGAAAAGGAACTGCTACACCCTGAAACCAAAACAGGGCAAGAACATCCCTTATCTCATCAGAGCTTACTTCGCCTATGGAAATTACGACGGCAAAAATACAACTCCAGCTTTCTACTTGTACCTTGGCGTCAGTTATTGGGACACTGTTAATCCGACGCTAGATTATCAATTCACGGAGATTATCCATAGTCCGACAACTGAGACCATACGCGTCTGCCTTGTGAAAAAAAGGGACTGGGGAATCCCTTTCATTTCTGCACTGGAACTACGACCTCTCAGCAATTCTATTTACCAAACTCCCTCACCTTCTCACTCACTTTTAGTCAAACGAGGAAGAATTGATGTTGCTTCCAATACTTCAATCAGGCACCGCAGGAAACAGAGTAATAGGGAACGAGCTATAGAGTGGAGAAGAATGGTATGCCTGCCTGTAATTACTGATAAGGCCAGGTACAAGGATGACATCTATGACCGTTTGTGGAGCAGCGTTGATGAAGAATATTGGCACCCGTTCAATGGATCTGCAGATATCGATCCTGGAAGCACAAATTATTCTTACAAATTACCAGCACAAGTACTGAGATCTGCAGCCCAACCATTGAGTGGCTCCTATGCTTTAAACTATGATTTTGACTCTCTTTGGAAAGACCTTGACAGGTCTTCCAAATATTATGTCTTCTTTCACTTTGCTGAAATTATGCGGCTTCCCCCTGGGCATAAAAGAAAAATTAATATTATTCTAAATGATGAAAACATCCTCTCCCAGCCTGTAATTCTTGAATACTTGAACCCACTGACCATTCAAAAGGAAACTCAAGGTTATGTTCGTTTTAGCATAAGTGCAACATCAGAATCCGATGCTCCCCCCATCCTCAATGCTTTTGAGGTTTATCAATTGATGTCATCAACATCCCCGACCGACCAAAGAGATGTGGATGCAATCATGGACATCAAGAAAAAATACAAGATCCCCAAAGTAGATTGGCAGGGAGATCCATGTATTCCTGAAGTTGCTAAGTGGGAGGGACTAAACTGCAGCTATGGCAATAATGTGAACAACGCAAGGATCACCTCAGTAAACCTGAGTGCAAGCCAATTGACAGGGCACATAGCGACGTCATTCTCACAACTTACAGAGTTGGAGTCTCTAGATTTGTCATTTAACGACTTGTCAGGATCGCTGCCAGAATTTCTCGCTGAATTGCCTAAGTTGAGAATCCTTAATTTGACTGGCAACAAGCTTACAGGTTTAATTCCCAACGCTCTCAAGGAAAAGTCAGAAGAAGTAACTTTTCAATTGAGTTGGGCTGATAATCCTGGTCTTCGTCTGACGGATGAACCATATAAAAAGCAGAAATTTGTCATTCCCCTTGTTGTGTCTATTTCAGCTTTAATTGTAATATTCCTCTTGGTTTCTCTAGTAATTTGGATCTTCAAAGCGAATAAACTAAATGTGGTTTTTAGAATTTCTAAGAAAGAAGAATCATCAGAAATAAAACATCGAGCGTTTTCGCGCTCAAAAGTTCTTAGTATCACTAGTAACTTACAAAACTTGATTGGAGAAGGAGGATTTGGGAAGGTTTATTTGGGTACTCTTAAGAATGATACTAAAGTTGCTGTGAAGTTACTTTCTCAATCATCAACACAAGGTCACAGGGAATTTCAATCAGAGGTAGAACTCTTAATGGTGGTTCATCATAGACACTTGGTTTCTCTAATTGGATACTGTGAAGAAGGAGGTATGAGGGCATTAATTTATGAATATATGGCTAATGGCAACCTTCGTCAACATTTATCAGATGAGAATCCAAAAGTTTTGAAATGGAAGGAGAGACTTCAAATTGCATTGGATGCAGCACGTGGATTGGACTATTTGCACAATGGTTGTAAAGCACCAATAATACACAGAGATTTAAAGACTTCCAATATTCTGCTAAACGAAAACATGTTAGCCAAGATTTCTGATTTTGGATTATCTAGAGCTTTTGCAAATGAAATTGATACTCATGTCTCTACACGTCCTGCTGGAACACTTGGATATCTTGACCCTGAATTTCAAAGTTCTGGGAACCTGACCAAAAGGAGTGATATATATAGTTTCGGGATAATTCTGCTTGAGCTAATAACAGGGAAACCAGCAATAAGACGAGAACCAAATGCCATCAGTCACATTCACATACTTCAATGGGTTATCCCTAAACTCAAAAGCAAGGATATCCAGTCCATCGTTGATCCAAGGTTACCAAGACAATACAGTGCTGATTCTGCTAGGAAATTTCTAGAGATCGCCATGTCATGCACTGCATCTTCTGCAATTCAAAGGCCTGAGATAAGTGAAGTAGTAGCTGAACTAAGGGAATGTTTGGCAGTGGAGATAACCATGGAAAGGAGCAGGGGCAACATCAATTCAAGCAGTTCCTTGGATACGAGCTCTTCGCAGTTTGATTCAGACTTCATTCTATCTGGTAGGTAG 2880 0.4122 MHTPQKLANIQGLSAASKSSQVALFQNNLRPSDHMEMATQWILSLSLRLAFIQLSLNHGNPKLVGRKLTNYDPNPGFISIDCGSAHDYLYEETGIRYQTDTNFVETGTNSEVHPSVNLEYPYFGGLLNTLRSFPDGKRNCYTLKPKQGKNIPYLIRAYFAYGNYDGKNTTPAFYLYLGVSYWDTVNPTLDYQFTEIIHSPTTETIRVCLVKKRDWGIPFISALELRPLSNSIYQTPSPSHSLLVKRGRIDVASNTSIRHRRKQSNRERAIEWRRMVCLPVITDKARYKDDIYDRLWSSVDEEYWHPFNGSADIDPGSTNYSYKLPAQVLRSAAQPLSGSYALNYDFDSLWKDLDRSSKYYVFFHFAEIMRLPPGHKRKINIILNDENILSQPVILEYLNPLTIQKETQGYVRFSISATSESDAPPILNAFEVYQLMSSTSPTDQRDVDAIMDIKKKYKIPKVDWQGDPCIPEVAKWEGLNCSYGNNVNNARITSVNLSASQLTGHIATSFSQLTELESLDLSFNDLSGSLPEFLAELPKLRILNLTGNKLTGLIPNALKEKSEEVTFQLSWADNPGLRLTDEPYKKQKFVIPLVVSISALIVIFLLVSLVIWIFKANKLNVVFRISKKEESSEIKHRAFSRSKVLSITSNLQNLIGEGGFGKVYLGTLKNDTKVAVKLLSQSSTQGHREFQSEVELLMVVHHRHLVSLIGYCEEGGMRALIYEYMANGNLRQHLSDENPKVLKWKERLQIALDAARGLDYLHNGCKAPIIHRDLKTSNILLNENMLAKISDFGLSRAFANEIDTHVSTRPAGTLGYLDPEFQSSGNLTKRSDIYSFGIILLELITGKPAIRREPNAISHIHILQWVIPKLKSKDIQSIVDPRLPRQYSADSARKFLEIAMSCTASSAIQRPEISEVVAELRECLAVEITMERSRGNINSSSSLDTSSSQFDSDFILSGR 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1501 959 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 725 933 - -
Dere12g1501 959 FunFam Leucine-rich repeat receptor-like kinase 445 578 - -
Dere12g1501 959 Gene3D Ribonuclease Inhibitor 445 568 IPR032675 -
Dere12g1501 959 Gene3D Phosphorylase Kinase; domain 1 655 725 - -
Dere12g1501 959 Pfam Leucine rich repeat 491 550 IPR001611 GO:0005515
Dere12g1501 959 SUPERFAMILY L domain-like 463 558 - -
Dere12g1501 959 Gene3D Transferase(Phosphotransferase) domain 1 726 942 - -
Dere12g1501 959 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524
Dere12g1501 959 PANTHER OS07G0107800 PROTEIN-RELATED 78 930 - -
Dere12g1501 959 SMART serkin_6 649 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1501 959 CDD STKc_IRAK 655 920 - -
Dere12g1501 959 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Dere12g1501 959 SUPERFAMILY Protein kinase-like (PK-like) 636 920 IPR011009 -
Dere12g1501 959 SMART LRR_typ_2 513 536 IPR003591 -
Dere12g1501 959 SMART LRR_typ_2 537 560 IPR003591 -
Dere12g1501 959 Pfam Protein tyrosine and serine/threonine kinase 651 920 IPR001245 GO:0004672|GO:0006468
Dere12g1501 959 Pfam Malectin-like domain 80 434 IPR024788 -
Dere12g1501 959 ProSiteProfiles Protein kinase domain profile. 649 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1501 959 MobiDBLite consensus disorder prediction 937 959 - -
Dere12g1501 959 FunFam Leucine-rich repeat receptor-like protein kinase 626 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1501 Dere-ChrDere12 27376811 27383609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1501 76 959 Receptor kinase-like Gene Family AT2G19210 42.556 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere12g1501 Malectin_like 2.1e-78 CL0202