Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1494 ATGACGAATTGGGAAAATATTTCGGTCTTGGAATTATGTCTTATCATTGTTTGGTTGATCGGTTCGGCCAACCCGAAGCCAGTCGCGGGAAACGAGGCCGAACATGATGGCTATATAACCATAGACTGTGGAGCAAGCGCAGATTACGTAGATGAAAACACAGGGATTTGGTACCAAACAGATGATAAGTTCGTAGAAAGTGGAACCAATCATGAGATCGTCAACCAATTCGACAATCAATATTTAGGACGGCAGTTGAATAGGCTAAGAAGCTTCCCAGATGGAGAACGAAACTGCTACACACTGAAGCCACAACAAGAGAAGAACCAAAAGTATCTGATCAGAGCTGTGTTTGCATATGGGAATTATGACAACAAAAACCAAGTTCCAGTTTTCGATCTCCACTTGGGTGTCAACCTTTGGGCAACAATTCATTTGCCTAATGCATCCTATTTCGAATTTTATGAAATGATTCTGCAGGTCCCAACTGACATCATACAAGTCTGTCTTGTGAACACTGAACTTGGCACTCCTTTCATTAACATTTTGGAATTAAGGCCCATAAACAACTCACTCTATTCTACTTCCCTGCCCTTATCTCTTAGGTCAAGAATTGACGTTGGCTCTCAGGATCAGAACTCTGCCATCAGGTATGAGGATGATGTATACGACCGCATATGGTCCCCTGATAAAACGAATGTTTCCTTCTGGGGTCCCTTCGATGTAACGAAGAATATAATGATAAAAGACACTTTTTACAAGCTTCCATCAGAAGTATTACGCACTGCCGTACAACCGCTGAATAATTCCAATTCCAGCCTCACATTTCGGAGTACGGGATATGATATATCTTACCAGTATTGTGTATTTCTTCACTTTGTTGAAATTCAAAAGCTCCCTCCTGGCCTCATGAGAATCATCAATGTCACTTTTGGTGATAATGAATCCATTTCTCAGCCACTGGAATACTTAAAGCCTGTCACCATCAGTTCCAAGAACCCAACACAAGGCTATGCTACATTCACAGTCGAAGCAACTGCTGAATCTGATGCTCCTCCTATCCTTAATGCCTTTGAAACTTACAAATTAATTCCACAACCTGGATCACCTACAAATGGACAAGACGGTTCAATTCCGATGGCTCTAAGAGAAAAAGCTAATTTGCAGCTGAGGTTTTCTTCTCTTCAACACCGAATTCTAGTTCATTTAGTTCAACTCTTAGCAATCGCTCATCATAGAAACTTGGTTTCACTTGTTGGGCATTGTCGTCAAGACAATGTCAAGGTCTTGATTTATGAATATATGGATAATGGAGACCTCAGCCAGCTATTATCAGAAAGTCTTGTAGATTTGTTAGGCAAAATTGATACATATGCTGGCAAGGGTAGAATCCAAACTCAAGCGTTCCTATAA 1413 0.4091 MTNWENISVLELCLIIVWLIGSANPKPVAGNEAEHDGYITIDCGASADYVDENTGIWYQTDDKFVESGTNHEIVNQFDNQYLGRQLNRLRSFPDGERNCYTLKPQQEKNQKYLIRAVFAYGNYDNKNQVPVFDLHLGVNLWATIHLPNASYFEFYEMILQVPTDIIQVCLVNTELGTPFINILELRPINNSLYSTSLPLSLRSRIDVGSQDQNSAIRYEDDVYDRIWSPDKTNVSFWGPFDVTKNIMIKDTFYKLPSEVLRTAVQPLNNSNSSLTFRSTGYDISYQYCVFLHFVEIQKLPPGLMRIINVTFGDNESISQPLEYLKPVTISSKNPTQGYATFTVEATAESDAPPILNAFETYKLIPQPGSPTNGQDGSIPMALREKANLQLRFSSLQHRILVHLVQLLAIAHHRNLVSLVGHCRQDNVKVLIYEYMDNGDLSQLLSESLVDLLGKIDTYAGKGRIQTQAFL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1494 470 PANTHER OS07G0107800 PROTEIN-RELATED 404 447 - -
Dere12g1494 470 Pfam Malectin-like domain 41 362 IPR024788 -
Dere12g1494 470 Gene3D Transferase(Phosphotransferase) domain 1 386 451 - -
Dere12g1494 470 Pfam Protein tyrosine and serine/threonine kinase 398 447 IPR001245 GO:0004672|GO:0006468
Dere12g1494 470 SUPERFAMILY Protein kinase-like (PK-like) 393 448 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1494 Dere-ChrDere12 27226284 27233886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1494 404 445 Receptor kinase-like Gene Family AT2G19230 47.619 1.68e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere12g1494 Malectin_like 4.4e-88 CL0202