Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1493 ATGAAGGATGCACCGAAGAGGATTCTGCTTTTACTTGCTTTCTTCATTGCTTTTCCCAGATCAAGCTTGGTAGCTTTAGATACGAATACCATTAATGTTCCGCCTCATAGGAAGCTTGCATCTGCTGATTCAGGTTACATAAGCATAGATTGTGGGATAAACGAGGCCTACACAGACAGCGAGAGCAACATTTGGTACCAACCAGATTCAAGTTTTGTAGAAACAGGTCAAAACCACATATTGCCCTCAGAATACAGCTTCGACGAACACCATATTTCGATGCAACTCAACACTCTGAGAAGCTTCCCAGATGGAGATAAGAACTGCTACACCCTCTCACCCAAACAGGGTAAAAACAACATGTACCTCATCAGAGCTTTCTTTGCTTATAGAAACTATGACTTGAAGAATACTACTCCAGCTTTCGATGTGTATCTCGGTGTGAATCACTGGAAGACCATTGAGTTTCAGAATATCTTGTCGTATTTTCTAGTTGATGTTATTCATGTTGCCTTGAGAGACACCATAAGTGTGTGTCTTGTAAACATCGGAAAAGGGGTTCCTTTTATTTCGTCGTTGGAGTTATGGTCTCTTAAGAATTCTACTTATCAAATCTCCAGTTCGCTTCCACAGGATGCAATGACACGGTCTAACCTTGGCATGTCTGAAGACGCCTTGTTCAGCAGGTATAAGGATGATATGTATGGTCGCGTGTGGTTTAACAGATACATCAGCAACTCAGATATAATAAACACATCAGCAGCTTTTGATACTAATGGAATAGAAAATACTTACAAACTGCCAACACAAGTATTGAAGACTGGAGTACAGTCTTTAAGTCTTAACTCTTCGTTGGAAATCTACTTTGACAACCATACTGATAGGTCCTACGAGTACTACGTGTACCTTCACTTTTTTGAATTTGAGCAAAAAGCACGAACTAAGAAAAGAGTCATGGATATTACTTTTAATGATGTGAGCATCCTCCCAGAGCCCTTTACTCCTCCATATTTGAAGCTTGTCACAATTGTTCGGAATATCACAAAAGCAGATTATCTTCGAATTTTGACCAAACCTGCCCCGGGATCTGATTTACCAGCCATGATTAATGCTTTTGAGGTTTACAGAGTTCTCAGCCAACCTAATTCTGCAACTCATCAAGAAGATGTTGATGCTATCTGGAGTATCAAACGTATTTATGAGATCCCTAGCATAAATTGGCAAGGAGACCCATGCGTTCCAACTAATTTTACATGGGAAGGTCTCACTTGCAGCTCTGATGGCAATCCAAGGATCATTTCACTGAACTTGAGTTCAAGGAGATTAACAGGGGACATAGATGGTTCATTTTCAAGATTCACTAAACTAGAGTCCTTGGATTTATCAAACAACAAACTGACTGGAGAAGTGCCTGAATTTTTCGCTGAGTTACCAAATTTGAAATTCCTTAATTTGACAGGAAATCAGCTCACAGGTTCAATCCCCAAATCACTGAAGCTAAAGTCAAATACCACTTTGTTATTGAGTTTGGAAGGAAATCCAGGTCTTTGTCTCGCTGGATCATGTGAGACAAAGAAGTCTCGTATCCCATTTATTGCATCTATAGTTGCATCCATAGCAGTTTGCGTAATGATTGTCCTCATTTATCTGATGATCCGAAGAATCAAAAGGAAGAAAGGAGCATCTAAAAAAGATGGACAGGAGAAATCAAAGAATCAAGTATTTTCATACAATGAGGTTATTAGAATTACCAATAACTTCAAAACTGTAATCGGGAAAGGAGGATTTGGAGAAGTATGCCTTGGTACTCTACAAGACGGTAGAAAAGTTGCTGTCAAGTTACTTTCACAGGCATCAAAGCAAGGATATAGAGAATTTCAATCAGAGGCAAATTTGTTGACTATTGTTCACCACAGAAACTTGGTTTCTCTTATCGGCTACTGTGATGAAGGCGATATCAACGCACTGGTTTATGAATATATGACCAAGGGGAATCTGCAGCAACTGTTGTCAGATAAAAACTCAAATGTTTTGAAGTGGTCTGAGAGACTTCAAATTGCAGTGGATGCTGCACATGGATTGGACTATCTGCATAATGGTTGTAAGCCACCCATAGTTCACAGAGACTTGAAGACTGCCAATATTTTGCTGAATGAAAACATGCAAGCCAAGATTTCTGACTTCGGCCTGTCTAGAGCTTTTGCCAATGAAAATGACACTCATGTATCAACTGTACCAGCTGGCACACTAGGGTACCTTGATCCTGAGTTTTACAGCTCTGGAAACTTGAACAGAAAGAGTGATGTTTACAGCTTTGGGATAATTCTGCTTGAGCTAATCACGGGTCAGCCTGCCATAAAATCAGCATCACCAGGGAACATCAGTCACATACTTCATTGGGTTAATCCTAAACTCAAGAATGGAGATATTGAATCCATAGTTGATCCAAGGTTACAAGGACAGTATAATACAAGTTCAGCTTGGAAATTTGTAGAGATTGCCATGTCTTGCATTCCGCCTACTGCAATCCAGAGGCCTGACATAAGTCATGTAGTGACTGAGCTAAAGGATTGTTTGGCTTTGGAAATCACCATTGAAAGAACAGAGAGCAGCAGGGGAAAATCCAGCAGTTCATTGGATAGGAGTTCTTTGAATTCTTTCCAGCTTGAATGTGTAAGAGGTCCATATGCTAGATAG 2697 0.4004 MKDAPKRILLLLAFFIAFPRSSLVALDTNTINVPPHRKLASADSGYISIDCGINEAYTDSESNIWYQPDSSFVETGQNHILPSEYSFDEHHISMQLNTLRSFPDGDKNCYTLSPKQGKNNMYLIRAFFAYRNYDLKNTTPAFDVYLGVNHWKTIEFQNILSYFLVDVIHVALRDTISVCLVNIGKGVPFISSLELWSLKNSTYQISSSLPQDAMTRSNLGMSEDALFSRYKDDMYGRVWFNRYISNSDIINTSAAFDTNGIENTYKLPTQVLKTGVQSLSLNSSLEIYFDNHTDRSYEYYVYLHFFEFEQKARTKKRVMDITFNDVSILPEPFTPPYLKLVTIVRNITKADYLRILTKPAPGSDLPAMINAFEVYRVLSQPNSATHQEDVDAIWSIKRIYEIPSINWQGDPCVPTNFTWEGLTCSSDGNPRIISLNLSSRRLTGDIDGSFSRFTKLESLDLSNNKLTGEVPEFFAELPNLKFLNLTGNQLTGSIPKSLKLKSNTTLLLSLEGNPGLCLAGSCETKKSRIPFIASIVASIAVCVMIVLIYLMIRRIKRKKGASKKDGQEKSKNQVFSYNEVIRITNNFKTVIGKGGFGEVCLGTLQDGRKVAVKLLSQASKQGYREFQSEANLLTIVHHRNLVSLIGYCDEGDINALVYEYMTKGNLQQLLSDKNSNVLKWSERLQIAVDAAHGLDYLHNGCKPPIVHRDLKTANILLNENMQAKISDFGLSRAFANENDTHVSTVPAGTLGYLDPEFYSSGNLNRKSDVYSFGIILLELITGQPAIKSASPGNISHILHWVNPKLKNGDIESIVDPRLQGQYNTSSAWKFVEIAMSCIPPTAIQRPDISHVVTELKDCLALEITIERTESSRGKSSSSLDRSSLNSFQLECVRGPYAR 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1493 898 SUPERFAMILY Protein kinase-like (PK-like) 570 855 IPR011009 -
Dere12g1493 898 SUPERFAMILY L domain-like 385 500 - -
Dere12g1493 898 FunFam Leucine-rich repeat receptor-like kinase 388 518 - -
Dere12g1493 898 ProSiteProfiles Leucine-rich repeat profile. 455 477 IPR001611 GO:0005515
Dere12g1493 898 PANTHER OS07G0107800 PROTEIN-RELATED 47 866 - -
Dere12g1493 898 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 661 868 - -
Dere12g1493 898 PRINTS Leucine-rich repeat signature 456 469 - -
Dere12g1493 898 PRINTS Leucine-rich repeat signature 477 490 - -
Dere12g1493 898 ProSiteProfiles Protein kinase domain profile. 585 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1493 898 CDD STKc_IRAK 591 856 - -
Dere12g1493 898 SMART serkin_6 585 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1493 898 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Dere12g1493 898 FunFam Leucine-rich repeat receptor-like protein kinase 562 660 - -
Dere12g1493 898 Gene3D Phosphorylase Kinase; domain 1 567 660 - -
Dere12g1493 898 Pfam Leucine rich repeat 434 490 IPR001611 GO:0005515
Dere12g1493 898 Pfam Malectin-like domain 49 377 IPR024788 -
Dere12g1493 898 Gene3D Transferase(Phosphotransferase) domain 1 661 876 - -
Dere12g1493 898 ProSiteProfiles Leucine-rich repeat profile. 479 501 IPR001611 GO:0005515
Dere12g1493 898 Pfam Protein tyrosine and serine/threonine kinase 587 855 IPR001245 GO:0004672|GO:0006468
Dere12g1493 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
Dere12g1493 898 Gene3D Ribonuclease Inhibitor 391 510 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1493 Dere-ChrDere12 27182908 27190926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1493 40 887 Receptor kinase-like Gene Family AT2G19210 42.775 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere12g1493 Malectin_like 1.8e-79 CL0202