Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere12g1449 | ATGGAAATGGGGACCAGCTTGCAATCAATGCTTCTGTTGGCTTCAATGATAGTATTGTTTCCATCACGAAGGGATTTCTCATGGATTTGTCTTAGAGATTTTGATTTGACTTCCTTCTGCACTCAGAGGAGCATAATAGACATTGTCAATGCACTCTTTCTCTGTGCTTTCTACATATCTTTTCTCAGCAGTTTGATCAGAAAAAACTATACAAGTGAGAGCCACAGAAGGGGGTGGGTTTCTTCAGCTGTCTCAGTTTGTTGTGCTCTTGTAAGCTTTGCATATTTCAGTAATGCTTTGTGGAATCTTATAGCCAAATCCGAAGCCTTGAAGCAGCTGGGGTGGTTAGTTCATCTATTCAGAGGACTAGTTTGGATTTCTCTGACAGTTTCTTTGCTTGTTCAGAGATCTACGTGTATAAAAATTCTAAACTCTGTTTGGTGGGCATCTTCATGCGTACTTGCCTCAGCTCTCAATATTGAGATTCTGTTCAGTGTGCATAATATTCAAATACTTGATATTTTTCAGTGGCCTGTTCATTTTTTACTTGCTTTCTGTGCCTTCCAAAGCTTTCATTTTGCACCTCAAAGCACTCAAAATACCACTATATCAGAGCCTCTTTTAACTCAAAAGGTTGATAAGAAACAAACAGAACTTGCACATGCCAATTTTTTCAGCAGTTTGACTTTCTCTTGGATTAATTCCTTACTGAGTTTAGGCTATTCGAAGCCACTAGCTCTTGATGATATCCCTTCTCTTGTTTCTGAAGATGAAGCTTATTTAGCTTATCAGAAGTTTTCTCATGCATGGGATTCCTTCTTGAGGGATCGGAGCAAGAACAATAATACCAAAAACCTAGTTATTCGGTCTATATCAAAAGTTTACTTGAAAGAGAACATTCTCATAGCAATCTGGGCATTGCTAAGGACAATTGCTGTTGTAGCTTCTCCTTTGTTGCTCTATGCTTTTGTGAACTATTCAAATAGTAAAGAGGAAAATCTAAAAGAGGGTCTTGCTATCTTGGGTTGCTTGGTTATCACCATGGTCTTTGAATCTTTGCCTCAAAGACACTGGTTTTATCACTCAAGAAGGTCAGGAATGCGATTGAGATCAGCTCTAATGGTGGCAATCTATAACAAGTTGTTGAAGCTTTCAAGTACAGCTAGAAGAAGACACTCAACTGGGGAAATAGTGAATTACATAGCAGTTGATGCCTATAGAATGGGAGAATTTCCATGGTGGTTTCACACCATATGGGCTTCTGCATTACAACTTTTTCTAGCCATTGGGGTTCTATTTGGTGTTGTGGGTCTTGGTGCTCTTCCTGGTTTGGTCCCTTTTCTCTTATGTGGCCTTCTTAATATCCCCTTTGCAAAGATCCTTCAAAAGTGTCAATCAGAATTTATGGTTGCACAGGATGAACGTCTAAGATCAACTTCGGAGATCCTAAATAATATGAAAATCATAAAGCTGCAATCTTGGGAGGAAAAGTTCAAGACTTTGGTTGAAACCCTTCGAGCCAAAGAGTTCACATGGTTGGCTAAGGCACAATTTACGAAAGCTTATGGGACGTTTATCTATTGGATGTCTCCTACCATTGTTTCCTCTGTAATTTTCCTAGGATGTGCTCTTTTCCAAAGTGCCCCTTTGAATGCTGGAACCATATTCACTGTTCTTGCAACTTTAAGGAGCATGGGAGAACCAGCTAGAATGATCCCAGAGGCTCTTTCTGTTATGATCCAAGTTAAGGTCTCCTTTGATCGTCTTAACACCTTTTTGCTTGACGATGAGCTACATGATGATGGCACTGGAACAAACTCAATGCAAAGTTCAGTTAATAGTGTGGAAATTCAAGGTGGTAACTTCAGTTGGGGTCAGGAATCCATGCCTCCAACTTTGCGAGATTTGAACGTAGAAATCAAATGGGGGCAGACAATTGCAATTTGTGGGCCAGTTGGAGCTGGAAAGTCATCCCTCATATACGCAATTCTTGGCGAGATACCCAAAATTTCAGGAACTGTTAACGTGGGTGGAACACTAGCCTACGTTTCTCAAACATCTTGGATCCAAAGTGGGACAATTCGCGATAATATACTCTTCGGCAAACCAATGAACAGAACCAGATATGACAATGCCCTTAAAGTTTGTGCCTTGGATAAGGATATCAACGCTTTCTGCCATGGTGATCTTACAGAAATAGGTCAGCGAGGGATCAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTGGCTCGGGCAGTATATAATGATGCTGATATTTATCTATTAGACGACCCTTTCAGTGCAGTGGATGCGCATACTGCTGCAATTCTATTCAATGATTGTGTCATGACCGCTCTGAGGAAGAAAACTGTCATTCTAGTGGCTCATCAAGTGGAGTTTCTCTCACAAGTTGATAAAATCATGGTAATGGAAGGAGGAAAAGTTACTCAATTAGGAAGTTATGAAGATCTTCTGACAAAAGGGACTGCCTTTGAACAACTTGTTAAAGCCCATAGAGAAGCAATATCAGGGTCAGATCAGAGCAATGAAATCCAAGGAGTATCTGACGATGTAGTTAGAGTTCTTCAGCCATTGGAGTCTCATGGCTTTCATCTCTCCAAGAATCACAAGAGTGATGGGGAAATTTCTACAAACGGTCAACCTGGAGTACAACTTACACAAGAAGAAGAAAAGGAGATTGGTGATGTTGGATGGAAACCATTCTGGAATTATCTTCTTCTCTCCAACGGATCATTGCTTCTGTGTTTAAGCATTTTAGCACAGTTGACTTTTATTGCTTTGCTAGCAGCATCAACTTATTGGCTTGCTCTAGCCATAGAAGTACCAAAAATAACTAATGGCATCTTGATTGGGGTTTACACAATAGTTTCACTTCTGAGTGCCGTCTTTGTATGCCTAAGGAGTATCATGGGTGCACATCTTGGATTAAAAGCTTCTTCATCCTTCTTCTCTAATATGAATAATGCTATCTTCAAGGCTCCTATGCTTTTCTTTGACTCAACCCCTGTGGGAAGGATTTTGACTCGAGTGAGATAA | 3060 | 0.4026 | MEMGTSLQSMLLLASMIVLFPSRRDFSWICLRDFDLTSFCTQRSIIDIVNALFLCAFYISFLSSLIRKNYTSESHRRGWVSSAVSVCCALVSFAYFSNALWNLIAKSEALKQLGWLVHLFRGLVWISLTVSLLVQRSTCIKILNSVWWASSCVLASALNIEILFSVHNIQILDIFQWPVHFLLAFCAFQSFHFAPQSTQNTTISEPLLTQKVDKKQTELAHANFFSSLTFSWINSLLSLGYSKPLALDDIPSLVSEDEAYLAYQKFSHAWDSFLRDRSKNNNTKNLVIRSISKVYLKENILIAIWALLRTIAVVASPLLLYAFVNYSNSKEENLKEGLAILGCLVITMVFESLPQRHWFYHSRRSGMRLRSALMVAIYNKLLKLSSTARRRHSTGEIVNYIAVDAYRMGEFPWWFHTIWASALQLFLAIGVLFGVVGLGALPGLVPFLLCGLLNIPFAKILQKCQSEFMVAQDERLRSTSEILNNMKIIKLQSWEEKFKTLVETLRAKEFTWLAKAQFTKAYGTFIYWMSPTIVSSVIFLGCALFQSAPLNAGTIFTVLATLRSMGEPARMIPEALSVMIQVKVSFDRLNTFLLDDELHDDGTGTNSMQSSVNSVEIQGGNFSWGQESMPPTLRDLNVEIKWGQTIAICGPVGAGKSSLIYAILGEIPKISGTVNVGGTLAYVSQTSWIQSGTIRDNILFGKPMNRTRYDNALKVCALDKDINAFCHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRKKTVILVAHQVEFLSQVDKIMVMEGGKVTQLGSYEDLLTKGTAFEQLVKAHREAISGSDQSNEIQGVSDDVVRVLQPLESHGFHLSKNHKSDGEISTNGQPGVQLTQEEEKEIGDVGWKPFWNYLLLSNGSLLLCLSILAQLTFIALLAASTYWLALAIEVPKITNGILIGVYTIVSLLSAVFVCLRSIMGAHLGLKASSSFFSNMNNAIFKAPMLFFDSTPVGRILTRVR | 1019 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere12g1449 | 1019 | Pfam | ABC transporter transmembrane region | 301 | 561 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Dere12g1449 | 1019 | Pfam | ABC transporter transmembrane region | 931 | 1018 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Dere12g1449 | 1019 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 611 | 837 | IPR027417 | - | |
Dere12g1449 | 1019 | FunFam | Multidrug resistance protein associated1 | 594 | 858 | - | - | |
Dere12g1449 | 1019 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 300 | 581 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Dere12g1449 | 1019 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 617 | 838 | IPR003439 | GO:0005524 | |
Dere12g1449 | 1019 | CDD | ABCC_MRP_domain1 | 615 | 815 | - | - | |
Dere12g1449 | 1019 | SUPERFAMILY | ABC transporter transmembrane region | 289 | 595 | IPR036640 | GO:0005524|GO:0016020 | |
Dere12g1449 | 1019 | CDD | ABC_6TM_ABCC_D1 | 301 | 589 | IPR044746 | GO:0140359 | |
Dere12g1449 | 1019 | Pfam | ABC transporter | 633 | 767 | IPR003439 | GO:0005524 | |
Dere12g1449 | 1019 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 220 | 1018 | - | - | |
Dere12g1449 | 1019 | Gene3D | - | 591 | 860 | IPR027417 | - | |
Dere12g1449 | 1019 | ProSitePatterns | ABC transporters family signature. | 740 | 754 | IPR017871 | GO:0005524|GO:0016887 | |
Dere12g1449 | 1019 | Gene3D | ABC transporter type 1, transmembrane domain | 290 | 590 | IPR036640 | GO:0005524|GO:0016020 | |
Dere12g1449 | 1019 | SMART | AAA_5 | 642 | 823 | IPR003593 | GO:0016887 | |
Dere12g1449 | 1019 | FunFam | ABC transporter C family member 10 | 283 | 597 | - | - | |
Dere12g1449 | 1019 | Gene3D | ABC transporter type 1, transmembrane domain | 864 | 1019 | IPR036640 | GO:0005524|GO:0016020 | |
Dere12g1449 | 1019 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 924 | 1019 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Dere12g1449 | 1019 | SUPERFAMILY | ABC transporter transmembrane region | 919 | 1018 | IPR036640 | GO:0005524|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere12g1449 | Dere-ChrDere12 | 26685633 | 26693887 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere12g1449 | 593 | 826 | Calmodulin-binding Proteins | AT2G36910 | 32.271 | 1.45e-24 | 109 |