Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1425 ATGGCAGATCCTACGGTTCTTCTGGATTTGGTGGAAAAGGCTTCGAAAATTGTGGTAAAAGGTCTAGAGTACAAAAACACTCGCAAACTCCTCAAGTCCACCACGGAGGATTTGAGTCCAGTGGTTGAACAGATCGAACAATACATTAAGGAGATGGATCACCCAACTGAAGAAGTGCAGAAGCTGAAGGGGATAATGGCCGCAAGCCAACAGGTTCTTGATAAGTACTCCAAACTCCGTTGGTGGAATTGGTGCTTTGCGCCATATTTTGAGGCCAAACTTGATGAACAGCACCAGTCAATTGTAAAGTACAGCTCGGTTCAAGTACAATTGCAGATGGCAAGGGATATGAAGGAAATCCTATCCAGGTTGAGTTCTGATGTTCATAGCCGTACGACCCAGACCATCTCAGCTCAGGTGATCAATACTAACAGGATACAAACATTCAAGGGTGATCTTGAAATGTTCCCAGCATTTACGGTGGGATTGGATGGTCCATTCATGAACGAGTTGAAGCATAAGCTACTTAATGGTGATGACCAGGTCATGAATTTGTATGGTCTACCAGGATCCGGGAAGACTACTATGGCTAAAAAGCTCTGTCGCGATCCCCAAGTCAAAGGTAAATTCAAGAATATCTCCTTTGAGACCTTGGGTTCACAGATTCAAATCAATGAAACAATCAACCGATTGCAAGATCAACTGTCCAAATTTGGGGAAAATCCAGTACTGTTAGTGCTGGACGATGTTTGGCCCAACTCAGAAGATATTGTTGAGGAGCTTAGGGTCCAAATATCATCAAATTCTAAAATTTTGGTGACTTCAAGACTTCAAATTAAAAGACCTGTCGCCCGACATCCCATGAAAGAACTTTCTGAAGAAGATGCAGTAAAGCTTCTCGTTCACTTTATTCAACCAAGTGACATCGATTTCGCTGACAATGAAATACATGAAATTCTCCTAAAGATAGTCCGAGGCTGCAAGCGTTTACCATTGGCTCTTGAATTCATTGGTAGCGAACTCCAAGGGAAGGGCATTGAGGAGTTGCAAAAGGTGGAGTTAGAATGGTCACGGGGCCTCAATATTCTTGATTCATATACAGAGTTGCTTACTCATCTCCAAAATTCCTTGCATCTCTTGGTAGATGAGTCTGTGAGGGAGTGCTTCATGGACCTTGGGTTATTTCCTGAAGATCAAAGGATCCCCATTACTGCCTTGATTGACATGTGGATAGAACTGCATAACCTAGATGAACTCGGCATATATGCAATGACCCTCATCCACAAATTAACAGCCATGAATTTGGCTGCCGGTATCAAAGTTAGAAGGATAGTTGGAAGTGATGCAGACAACTACTACAATAACCACTTCCTCACGCAGCATGATCTTTTCCGAGAGCTAGCCATCCGTATAAGCAGCCAAGAGCCATTTGAGAATAGGAAAAGACTGATCATTGACATGAATGGGAATCATTGTCCAGAATGGTGGCCCCAGCAACAACAACAGCAACAGCAACAACAGCAAGGGATCGCCGCCCGTACGTTATCCTATTTTAGCAATTGGTTCATGGACCCAAAGCAGCAAAGGGTAGCTGCTCCAATACTGTCAATATCAACTGATCAAAACATCACTCCAGATTGGTGCAACATTCAAGCAGCCGAGGCTGTGGTTCTGGTTTTGAATCTTAAGACGTCAGAATACATGTTACCAGAATTTATTAAAAATATGAGAAACCTGAAAGTTATTATAGTCGCCAATTATGGTACCCGTCCCACTGAGTTAAAAAACCACAAGGTGCTGGTTTCTTTACAGAGACTCAAAAGAATCAGATTGCAGCAGGTTTCAGTTCCTTCTCTTCGCGAATTAAATAAGGTGCAAAAGTTATCACTTTACATGTGTGAAGTGAAGATGGCTTTTGAAAACAGTTCCATCCAATTCTCAAAAGCAATGCCACATCTGGTGGACTTGAACATTGAGTATTGCAAAGATTTGATGAAGTTGCCTGCTGGTCTCTGCGATATTGCCACCCTGAAGAAGCTCAGCGTCAGTAATTGCCACAAGTTTATTGAACTTCCCCAAGAAATTGGAAAGCTTGAGAATTTGGAATTACTAAGGATTAGTTACTGTGCTGATTTTGAGGAGATGCCAGAGTCAATCACAAAGCTCAAGAGTCTAACATTTCTTGACATCTCATACTGCGTAAGCCTTGGAAAATTACCAGGCAACATTGGTGAGCTGAGGAGTCTAAGAAAGCTTTATATGACGGGTTGTCCAATACACGAATTGCCAGACTCAGCGAACCATATGGAGCATTTAGAGACTGTGATATGCGATGACTATACATATCCCTTGTGGGAAGTTGTCAAATCTTTCCGTTCTCGACTAAACATAAAGACGGCAAAGGACATTAGCTTAAACTGGCTTATCTGA 2430 0.4235 MADPTVLLDLVEKASKIVVKGLEYKNTRKLLKSTTEDLSPVVEQIEQYIKEMDHPTEEVQKLKGIMAASQQVLDKYSKLRWWNWCFAPYFEAKLDEQHQSIVKYSSVQVQLQMARDMKEILSRLSSDVHSRTTQTISAQVINTNRIQTFKGDLEMFPAFTVGLDGPFMNELKHKLLNGDDQVMNLYGLPGSGKTTMAKKLCRDPQVKGKFKNISFETLGSQIQINETINRLQDQLSKFGENPVLLVLDDVWPNSEDIVEELRVQISSNSKILVTSRLQIKRPVARHPMKELSEEDAVKLLVHFIQPSDIDFADNEIHEILLKIVRGCKRLPLALEFIGSELQGKGIEELQKVELEWSRGLNILDSYTELLTHLQNSLHLLVDESVRECFMDLGLFPEDQRIPITALIDMWIELHNLDELGIYAMTLIHKLTAMNLAAGIKVRRIVGSDADNYYNNHFLTQHDLFRELAIRISSQEPFENRKRLIIDMNGNHCPEWWPQQQQQQQQQQQGIAARTLSYFSNWFMDPKQQRVAAPILSISTDQNITPDWCNIQAAEAVVLVLNLKTSEYMLPEFIKNMRNLKVIIVANYGTRPTELKNHKVLVSLQRLKRIRLQQVSVPSLRELNKVQKLSLYMCEVKMAFENSSIQFSKAMPHLVDLNIEYCKDLMKLPAGLCDIATLKKLSVSNCHKFIELPQEIGKLENLELLRISYCADFEEMPESITKLKSLTFLDISYCVSLGKLPGNIGELRSLRKLYMTGCPIHELPDSANHMEHLETVICDDYTYPLWEVVKSFRSRLNIKTAKDISLNWLI 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1425 809 Pfam NB-ARC domain 168 352 IPR002182 GO:0043531
Dere12g1425 809 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 126 IPR008808 -
Dere12g1425 809 ProSiteProfiles RPW8 domain profile. 1 143 IPR008808 -
Dere12g1425 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 392 IPR027417 -
Dere12g1425 809 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 7 808 IPR039203 GO:0050832
Dere12g1425 809 PRINTS Disease resistance protein signature 182 197 - -
Dere12g1425 809 PRINTS Disease resistance protein signature 720 736 - -
Dere12g1425 809 PRINTS Disease resistance protein signature 327 341 - -
Dere12g1425 809 SUPERFAMILY L domain-like 460 779 - -
Dere12g1425 809 Gene3D - 377 469 IPR036388 -
Dere12g1425 809 Gene3D - 138 284 IPR027417 -
Dere12g1425 809 Gene3D - 290 376 IPR042197 -
Dere12g1425 809 Gene3D Ribonuclease Inhibitor 538 793 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1425 Dere-ChrDere12 26238618 26241939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1425 602 776 WRKY Transcription Factor Family AT4G12020 27.638 9.95e-11 63.9