Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1402 ATGGAAAAGGAGGAGACCTTCATATGCACTGTTCCTATGTTCCATATATACGGTTTAGCAGTGTTTGCAATGGGTCTACTAGCTTCGGGATCAATTATAGTGGTGCTATCCAAGTTTGACATGGACGACATGCTTTCAGCGATCCAGAAGTACCATGCAACATACCTGTCGCTGGTCTCGCCCATACTTATGGCAATGATAAACGGAGCAGATGCGATAAAGGTGAAGTACAACTTGAGTTCACTACACTCGGTGTGGTCGGGTGGGGCTCTACTGAGCAAGGAGGTGATAGAGGGGTTTGTGGAGAAGTACCCTCATGTGACAATTCTTCAAGGTTACAGGTTGAACGAATCAATGGGGGTCGGGGCATCCATGGACTTGTTGGAGGAAAGTAGGAGGTACAGTACGGCTGGGCTATTGTCACCGAGCACGGAGGCCAGAATTGTGGACCTTGAAATGGGAGAAACTTTGCTGGTTAATTGGACGAGTGAGCTCTGGCTCAGAGGTCCTACTATCATGAAAGGTTATTTTAGTAACCAGGAACCAACTACCTCAACCCTTGATTCAGAGGGATGGTTAACAATAGGGGATATTTGCTATATTGAAAATGATGGACATATCTTCATCGTCGATAGGTTAAAAGAGCTCATTAAGTACAAGAGATATCAGGTCCCACCAGTAGAACTCGAGGCTGTGTTGCTTACTCATCTTGTAATTTCTGATGCTGTTGTCTTACCATTCCCAGACAAGGAGGTTGGGCAATTTCCAATGGCATACGTGGTAAGGAAAACTGGAACTAATATATCTAGAAAGGAAATTATGGATTTTGTAGCAGCACAGGCATCTCCTAAGCATCATTTGTTGTCTCCAATTGCTTCAACAAAGAGTCAAATTGTCTGGTGTTGTGATGGGGATGCTACATCCATAGATATTGTCTTTGCTTCAAAACAGCTTATGTAG 960 0.4406 MEKEETFICTVPMFHIYGLAVFAMGLLASGSIIVVLSKFDMDDMLSAIQKYHATYLSLVSPILMAMINGADAIKVKYNLSSLHSVWSGGALLSKEVIEGFVEKYPHVTILQGYRLNESMGVGASMDLLEESRRYSTAGLLSPSTEARIVDLEMGETLLVNWTSELWLRGPTIMKGYFSNQEPTTSTLDSEGWLTIGDICYIENDGHIFIVDRLKELIKYKRYQVPPVELEAVLLTHLVISDAVVLPFPDKEVGQFPMAYVVRKTGTNISRKEIMDFVAAQASPKHHLLSPIASTKSQIVWCCDGDATSIDIVFASKQLM 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1402 319 SUPERFAMILY Acetyl-CoA synthetase-like 3 283 - -
Dere12g1402 319 Gene3D - 2 133 - -
Dere12g1402 319 Gene3D Luciferase; Domain 3 134 212 - -
Dere12g1402 319 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 3 287 - -
Dere12g1402 319 Pfam AMP-binding enzyme 3 219 IPR000873 -
Dere12g1402 319 Pfam AMP-binding enzyme C-terminal domain 228 281 IPR025110 -
Dere12g1402 319 Gene3D - 213 301 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1402 Dere-ChrDere12 25723018 25724140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1402 1 283 Monolignol Biosynthesis Gene Families AT1G20500 60.424 1.97e-126 370