Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1399 ATGGACCTGCAGAAAGAGAGAATTAAAAGTGGATGCCAGAAGATTCTGGAAGGAATAGATTCAATGTCTTTGGTAAATTTAGATGACCAGCAGGTACATTCATTAGTAATGATGAGAGAAATAGCTCGTGGGGTTGTTGATGATCGAGATAGAAAGGTGACAAAGAATGACGTGATTAGTGCGTTGCGCTACAGTATCGAGAAAATGGTGTGTGCTTCCAGGGATATCATTGAAGTATTAAGCAGGATGTCATATGAAGGGTTAGATGACCAAAGAATGCATTTAGTATTGAAGATGAAAGAAATTGCACATGGGATTGTTGATAAACAAGCTAGAGTTGCTATAACTAGGCATGACATACTCGCAGAACAAGTTGGAGTTGGTGATGAAGGGATGAGAGATAGTCCAATGATTGAGTCAATAAAGACCAGCAATGGTGATGTCCTCATTGATGGGGGACAAAGCCTGATAAATGAAGAGGAGATGTTGGAGGTAGAACATGTTTTAAGACTTGAAAATGGAATAAATGAAGTACAGGAGTCTCTGTTGCCATCATCCTTTCAGCAATTTCTTCTGTGGCCTCCAGATGATTGCATCACCTTAGAGTGGGTTCAAGACATGATGTTTACCCTCGAGCAGGCTTCTGAGAAGATGTTGCCATCTGACTTCTGCCATGTCATTCCATCCATTTTGGTTGATAAATTGACCGATACTGCTTGCAGTATACTATGTAAAGAACCAAATTGTGTAGAGATCAATTGTCAAGGAGAAGATTCAAGAGTCATCATAGTAGGCGACATACATGGGCAGTTTTATGATTTACTGTTTCTTTTTAAGCATGTTGGCATGCCTTCTGAGAGCCAGTTTTATGTATTCAATGGAAACTATGTAGATAAAGGAGCATGGGGCATGGAGGTATTATTGGTCTTGCTAGCTTGGAAGGTCTTGATGCCTCACAGAGTATATCTACTCCGTGGAAATCATGAATCAAGATATTGCACTGCAAGATATGGTTTTAAGAAGGAGGTGTGGGCGAAATATGGCGATCAAGGTGAAAATGTCTACAATAAATGCCTAGAGTGTTTCAAGGAGCTTCCATTAGCTTCAGTTATAGGTGGCTGTGTTTATACTACTCATGGAGGGCTTTTCCGCAGCAGAAAAGCTGCCCCTTCACGGAAGCCAAAACGGAAGAAAACGCAAAGAGTGGATCTTGGGTCTTTAGCCGAGTTATCTGAAGTTAAGAGATCTTTTGTAGATCCCCCTTATGAAGGTCCTAGCGTATTATTGAGTGACATGCTTTGGTCAAAACCATCTATAAAAGACGGTTTGAGGGATAATGCAGGTCGAAAATTAGGTCTTTGGTGGGGTCCTGATTGCACCGAGGCTTTCTTAAAACAGAACAAGTTGAAGCTGATCATCAGATCACATGAAGGACCCGATGCAAGGGTTGGTCGGGATGATTTTGGGGATATGCTGAGTGGATACAGCTTGGATCATGATGGAGAATCAGGAAAGCTGTATACACTTTTCAGTGCTCCTGACTACCCACAGTTTGGTAAGAGGAGATATAACAACGAAGGAGCATACGTTATATTGAATTCGCCTCAATTTGAAAGTCCTATTTTTCACTCGTTCAAATCTGCAGAAAGACCCAAGGTGGATCCTTATGTTGATTATGATGCTGATGAAATGGATTTTAGCAAACTAGACTCTTTTCCAATGAATGCACAGGCCTCAACCTCTGCTATTTCAGCTTCTCAAAGATCCTATCCAGCCGGGGTGATGCCTGGGTTTGATTTCGGGGCATTGGGCATTTATAATGCCCCATCTTGGAGTGTTCAGCTTCCTGATGATTCAGGTGGCACCCAAGTTGTGGAGGTTCCAAGGGCTCCTGTGGTGGAGGGATTGCCTCTTCCTAACAACATACAGGAGCCTCACAAGGCTGCTTATGAGTATTTGTTCGAGCTCATCGCTTCTCTAAAACTAATGCTTATAACAAGGGAGACTAACAACAGGGCAAGTTCGTCAGCTTTGCGAAGTAGAGCTAGGAAACGAAAAGGAGGGGGTAGTAGTTAA 2076 0.4224 MDLQKERIKSGCQKILEGIDSMSLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKNDVISALRYSIEKMVCASRDIIEVLSRMSYEGLDDQRMHLVLKMKEIAHGIVDKQARVAITRHDILAEQVGVGDEGMRDSPMIESIKTSNGDVLIDGGQSLINEEEMLEVEHVLRLENGINEVQESLLPSSFQQFLLWPPDDCITLEWVQDMMFTLEQASEKMLPSDFCHVIPSILVDKLTDTACSILCKEPNCVEINCQGEDSRVIIVGDIHGQFYDLLFLFKHVGMPSESQFYVFNGNYVDKGAWGMEVLLVLLAWKVLMPHRVYLLRGNHESRYCTARYGFKKEVWAKYGDQGENVYNKCLECFKELPLASVIGGCVYTTHGGLFRSRKAAPSRKPKRKKTQRVDLGSLAELSEVKRSFVDPPYEGPSVLLSDMLWSKPSIKDGLRDNAGRKLGLWWGPDCTEAFLKQNKLKLIIRSHEGPDARVGRDDFGDMLSGYSLDHDGESGKLYTLFSAPDYPQFGKRRYNNEGAYVILNSPQFESPIFHSFKSAERPKVDPYVDYDADEMDFSKLDSFPMNAQASTSAISASQRSYPAGVMPGFDFGALGIYNAPSWSVQLPDDSGGTQVVEVPRAPVVEGLPLPNNIQEPHKAAYEYLFELIASLKLMLITRETNNRASSSALRSRARKRKGGGSS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1399 691 SMART pp2a_7 227 549 IPR006186 GO:0016787
Dere12g1399 691 Pfam Calcineurin-like phosphoesterase 260 479 IPR004843 GO:0016787
Dere12g1399 691 ProSitePatterns Serine/threonine specific protein phosphatases signature. 324 329 IPR006186 GO:0016787
Dere12g1399 691 Gene3D - 206 568 IPR029052 -
Dere12g1399 691 SUPERFAMILY Metallo-dependent phosphatases 223 554 IPR029052 -
Dere12g1399 691 PRINTS Serine/threonine phosphatase family signature 411 438 IPR006186 GO:0016787
Dere12g1399 691 PRINTS Serine/threonine phosphatase family signature 260 287 IPR006186 GO:0016787
Dere12g1399 691 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Dere12g1399 691 PRINTS Serine/threonine phosphatase family signature 323 347 IPR006186 GO:0016787
Dere12g1399 691 PRINTS Serine/threonine phosphatase family signature 360 386 IPR006186 GO:0016787
Dere12g1399 691 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Dere12g1399 691 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1399 Dere-ChrDere12 25673307 25679164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1399 191 471 Calmodulin-binding Proteins AT5G63870 52.921 1.04e-100 309