Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1395 ATGGGTGGTTCGGGAAAGTGGTTAAAATCACTCATTTCTTCTAAAAAGCCCACCCCAAATGATCAAGAGAAGGCTGGTGGTGATAAGAGTAAGAAGAAGTGGAGGCTGTGGAAGAGCTCTTCGGAAGGCATTGGATCATCCACAAAAGGCATGACGAAGAAGGGAAACGGTGTCGTATCAGACAAGTCGGATTCTTCGTTTCTGTTAGCTGATGCATTTACTGCTGCCATGGCTGCTGTGGTCCGAGCTCCACCTAAAGGTTTCATGATGATCAAGCAGGAATGGGCTGCCATCCGTATTCAGGCTCTGTTTCGAGGATTTTTGGCAAGACGAGCTTTGAGGGCCTTAAGGGCAGTGGTGAGAATTCAAGCTATATTTCGTGGGAGACAAGTGAGGAAGCAAGCAGCAGTTACTCTAAGGTGCATGCAGGCTCTTGTTAGAGTTCAGGCACGTGTCAAAGCAAGGAGTGTGAGCTTGTCTCCAGAAAGGAAACGCACCGAAGCTAATAATATTAAGCAGGCAGAGAGAGGATGGTGTGACCTTCCAGGAAGTGTGGATGAAGTTAAAGCAAAGTTACAAATGAGGCAAGAAGCAGCCATCAGAAGGGAGAGAGCAATGGCATACTCTCTCACTGCACAGCAATCAAGAGCGAGTGCTAGTCCAAACTCTAGATTCTCAAAGCCAATGTCTCCACTCAAACATGGCAGCCTAGACAGTAGGAACTTATTAGAGCGATGGATGGCAGCTAAGCCATGGGAAAACAGGTGGAAGGAGGACAGATATTTTGATACACCAGACATGACTCCATTGTCTAGGAAAAGTGACAACCTTGTGCTCCCCAAAGCAAGAAAGAATGCTGTGACAACCAGGGTTTCATCAAAACCTCCCATAACCTGCCTATCAACTCCATCATCATTCTCCTCATCTTCTGCCATAAGTTCTGAATGCATGTATGATGATAGCCCTTTATCAGCTTCATGCACATCACCTGAGGACAGGAGTGTTCGTAAACCTGGCTTCATGAATTTCAGAGAGTCAACCAAGGCCAAACAGAGAGCTTGCAAGTGTTCTTCTCTGAATGGAGATGCTAGAAGCACTTCTGGTTCTGATTTTTCAGTAAATTTTTGGAGAGATTGTTATGCAACCCCTCAAAGGGCAAGTTATCAGAGAAGAAACTCCAGGAGATAA 1188 0.4579 MGGSGKWLKSLISSKKPTPNDQEKAGGDKSKKKWRLWKSSSEGIGSSTKGMTKKGNGVVSDKSDSSFLLADAFTAAMAAVVRAPPKGFMMIKQEWAAIRIQALFRGFLARRALRALRAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQARVKARSVSLSPERKRTEANNIKQAERGWCDLPGSVDEVKAKLQMRQEAAIRRERAMAYSLTAQQSRASASPNSRFSKPMSPLKHGSLDSRNLLERWMAAKPWENRWKEDRYFDTPDMTPLSRKSDNLVLPKARKNAVTTRVSSKPPITCLSTPSSFSSSSAISSECMYDDSPLSASCTSPEDRSVRKPGFMNFRESTKAKQRACKCSSLNGDARSTSGSDFSVNFWRDCYATPQRASYQRRNSRR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1395 395 MobiDBLite consensus disorder prediction 1 58 - -
Dere12g1395 395 MobiDBLite consensus disorder prediction 40 58 - -
Dere12g1395 395 Gene3D - 91 145 - -
Dere12g1395 395 MobiDBLite consensus disorder prediction 212 233 - -
Dere12g1395 395 PANTHER IQ-DOMAIN 5-RELATED 1 364 - -
Dere12g1395 395 Pfam IQ calmodulin-binding motif 117 134 IPR000048 GO:0005515
Dere12g1395 395 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Dere12g1395 395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 135 IPR027417 -
Dere12g1395 395 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Dere12g1395 395 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Dere12g1395 395 SMART iq_5 115 136 IPR000048 GO:0005515
Dere12g1395 395 SMART iq_5 92 114 IPR000048 GO:0005515
Dere12g1395 395 MobiDBLite consensus disorder prediction 212 229 - -
Dere12g1395 395 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1395 Dere-ChrDere12 25594565 25597202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1395 1 384 IQD Protein Family AT1G72670 48.804 5.24e-99 299