Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1394 ATGGAAACGGTGGGGATTAGACCTATGGACTTTGAGTCTAACGAAGGAGAGATCACATTGAGAACAAGTAGCTTCAAGAAGCGCAGTTTTAATGATTTTTATAAACCTGATAAGCTAGATGAGGTTGTTTCTGAAGAATCTAATTACCCAAAGAGAAGGAAGGTGGCAAATCTGAAGCTGCAGACCACATTCTCACTCAAATATCTAGTTTCAGAGAATTTCCATCTGGGGGGGAAACTTGAGAACTTGTTCAATAAACAAAGCCCCACAATTAATTTACCAAAACCAGAAATTTGGTTCTCTCCAAAGTCCATTGGCGAGCTTGACGTAGCTGCAATCAAGGTGCAGAAAGTTTACAAGAGTTATCGGACAAGAAGAAATCTAGCAGATTGCGCAGTTGTCTGTGAGGAGCTATGGTGGAAGGCTTTAGACTTCGCAACTCTTAACCGATGCTCTATATCACATTTTGACTCTGATAAATCAGAAACAGCTGTTTCAAAATGGGCTAGAGCTAGGACCATGGCTGCTAAGGTGGGAAAGGGTTTGTCCAAAGATGATAAGGCGCAGAAGTTAGCTCTAAGGCACTGGCTTGAAGCTATTGATCCCCGTCATCGTTATGGGCACAACCTTCACATCTACTATGATGTCTGGTTTCACAGCCAGAGCTCGCAGCCATTTTTCTACTGGTTGGATGTTGGAGATGGCAAAGAACTAAACCTTGACAAGTGCCCAAGAAGTGATTTACATAAGCAGTGCATAAAGTACCTTGGACCGAAAGAGAGGGAGGCATATGAAGTGACTGTGAAGCGTGGAAGGCTAGTTTATAGACAGAGCCAGGCTCTTGTACGCACTTATGAGGGATCCAAGTGGATTTTTGTTCTAAGTGCATCAAGAACTATGTACATTGGGGAGAAGAAGAAAGGCCTATTCCAGCACTCGAGTTTTCTAGCTGGTGGTGCTACCATTGCATCTGGAAGATTGGTTGCTCTGAATGGAGTTCTTGATGCTATCTGGCCCTACAGTGGTCACTACCGTCCAACGGAGAAAAACTTCAAGGAATTTATTGGCTTCTTGGAAGAACATAACGTGGACTTGACAAATGTAAAGACATATGCAGTTGATGAAGATGTGCCTCCTTCTGTAGCAGTTGATGATGAAGAACAGCCATCTGAGTCCACAGAAGGAAATGTGGGTCCCAGTGAGGCTGCCCTTGCCAATGGTTCTGACAAAGAAAGAGAGGTGGGCCACTTTGGAACCAAAGTGGAAACTTCTTCACAGCATAAAAAGGGCAACAAGTCTTTGTCAAGCAAATGGACCACTGGAGCTGGTCCTCGGATTGGTTGTGTCAGAGAATACCCAACAAAACTCCAAGTTCAGGCACTAGAAAAGCTTAATCTATCTCCTAGAGTCACACCTCCAAAATTTTCTATCAACTTACCTATTCCCTCCCCAAGACCCACTTCAAAAATCCACTTATCACCTAGACTTGTGCATATGGGAGTTCCTAGCCCTACGGTTCATCATCATGATACTCCTTCAAATTAA 1545 0.4356 METVGIRPMDFESNEGEITLRTSSFKKRSFNDFYKPDKLDEVVSEESNYPKRRKVANLKLQTTFSLKYLVSENFHLGGKLENLFNKQSPTINLPKPEIWFSPKSIGELDVAAIKVQKVYKSYRTRRNLADCAVVCEELWWKALDFATLNRCSISHFDSDKSETAVSKWARARTMAAKVGKGLSKDDKAQKLALRHWLEAIDPRHRYGHNLHIYYDVWFHSQSSQPFFYWLDVGDGKELNLDKCPRSDLHKQCIKYLGPKEREAYEVTVKRGRLVYRQSQALVRTYEGSKWIFVLSASRTMYIGEKKKGLFQHSSFLAGGATIASGRLVALNGVLDAIWPYSGHYRPTEKNFKEFIGFLEEHNVDLTNVKTYAVDEDVPPSVAVDDEEQPSESTEGNVGPSEAALANGSDKEREVGHFGTKVETSSQHKKGNKSLSSKWTTGAGPRIGCVREYPTKLQVQALEKLNLSPRVTPPKFSINLPIPSPRPTSKIHLSPRLVHMGVPSPTVHHHDTPSN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1394 514 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 57 489 IPR044159 -
Dere12g1394 514 MobiDBLite consensus disorder prediction 406 427 - -
Dere12g1394 514 MobiDBLite consensus disorder prediction 376 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1394 Dere-ChrDere12 25588908 25592252 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1511 11 27730930 27745177 Dere12g1394 12 25588908 25592252 CCT
Dere12g1394 12 25588908 25592252 Dere12g1394 12 25588908 25592252 ECH