Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1381 ATGTCTTCTCCTTCTCCTTCCAAAGACGTCGACGACGCCTCCAAATCCGACCACCTCCCTCTCAGACCGGTCCCCGGCGGCTATGGCCTCCCATTCTTCGGCGCCATTTTTGACCGTTACGACTACTACTACAACCAGGGCCGGGACAAGTTCTTCACCTCTAGAATCCGCAAGCACAACTCCACCGTCTTCCGCACCAACATGCCGCCCGGTCCCTTCGTCGCTTCAGACCCGAGGGTTGTCGCCGTCCTCGACGCCGTCAGTTTCCCCGTCCTCTTTGACGTGTCCAAGGTCCAGAAGCGCGACGTCTTCACCGGCACCTACATGCCCTCCACCACCTTCACCGGCGGCTACCGCGTCTGCGCCTACCTCGACCCCTCCGAGTCCAGGCACGCCCTCCTCAAGCGCTTCTTTTTCTACCTCCTCGCCTCCAAAAAAGACCAGGTCCTCCCCCTTCTCCGAAGCCACTTGTCTGAGATGTTTCGTAAGCTGGAAGACAAGGTCTCCGACAGAGGCCAAGTCTATTTCAACTCCATAAGCGACAGCGAGCTCTTTAATTTCGTGTTTCGGCTGTACTGTGGAAAGGATCCGACCCAAACAAAACTCGGCTCCTGGGGTCCGAAATACTTCGAGCTATGGGTATATCCTCAGGTTGCTCCACTTGGATCTCTTGGACTACCCTGGTACTTCTTCCCTATTAACGTAGTCGAAGACTTCTTCCTCCATACGGTGCCGTTTCCTGCATTTTTGCTCAAGTTTGTTCACCGAAAGCTATACGACGCCGTTTACACGTCCGCCGTAGAGGCATTAGATGAAGCGGCGCGTTTAGGGCTTAGTAAAGAAGAAGCATGCAATAATCTGTTATTCGTGCTGGGGTTTAACACCTACGGTGGGGTTAAAATTGTAATTCCCTGTATGATGAAGTGGGTGGGATTAGCTGGGGAGGGTCTACACAAGGAGCTAGCGGAGGAAATAAGGAGCGTGGTGAAGGCAGAAGGAGGCGTGACATTAGGAGCGTTGGATAAGATGACTTTGACCAAATCAGTGGTGTGGGAAGTACTGAGGATAGACCCGCCGGTTCAGTTCCAGTACGGGAAGGCGAAGGAGGACGTGGTAGTCCGGAGCCACGACGCAGCTTTTCAGGTGAAGAAGGGCGAGATGCTGTTTGGATACCAGCCGTTGGCTACGAGGGATCCGAGGGTGTTCGAGAATCCGGAGGAGTTTGTGGGCCACCGGTTTGTCGGGGAAGAAGGAGAGAAACTGTTGAAGTACGTGTACTGGTCGAATGGGAGAGAGACGGTGGGGCCCACGGAGGAGGACAAGCAGTGTCCCGGGAAGGATCTGGTGGTGCTCATGCTCAGGGTAACGTTGGTGGAGCTGTTCCTGCGTTACGACACGTTTACGGTGAAGCTTGGAAAGCCCTTGCTGGGTCCTACAGTTACCATCACGTCGTTGAACAAGGCCACGTCATACTGA 1476 0.5454 MSSPSPSKDVDDASKSDHLPLRPVPGGYGLPFFGAIFDRYDYYYNQGRDKFFTSRIRKHNSTVFRTNMPPGPFVASDPRVVAVLDAVSFPVLFDVSKVQKRDVFTGTYMPSTTFTGGYRVCAYLDPSESRHALLKRFFFYLLASKKDQVLPLLRSHLSEMFRKLEDKVSDRGQVYFNSISDSELFNFVFRLYCGKDPTQTKLGSWGPKYFELWVYPQVAPLGSLGLPWYFFPINVVEDFFLHTVPFPAFLLKFVHRKLYDAVYTSAVEALDEAARLGLSKEEACNNLLFVLGFNTYGGVKIVIPCMMKWVGLAGEGLHKELAEEIRSVVKAEGGVTLGALDKMTLTKSVVWEVLRIDPPVQFQYGKAKEDVVVRSHDAAFQVKKGEMLFGYQPLATRDPRVFENPEEFVGHRFVGEEGEKLLKYVYWSNGRETVGPTEEDKQCPGKDLVVLMLRVTLVELFLRYDTFTVKLGKPLLGPTVTITSLNKATSY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1381 491 FunFam Allene oxide synthase, chloroplastic 19 490 - -
Dere12g1381 491 Pfam Cytochrome P450 318 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1381 491 PRINTS E-class P450 group IV signature 443 461 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1381 491 PRINTS E-class P450 group IV signature 396 414 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1381 491 PRINTS E-class P450 group IV signature 343 359 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1381 491 PRINTS E-class P450 group IV signature 380 394 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1381 491 Gene3D Cytochrome P450 19 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1381 491 PANTHER CYTOCHROME P450 26 19 467 - -
Dere12g1381 491 SUPERFAMILY Cytochrome P450 20 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1381 491 CDD CYP74 54 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1381 Dere-ChrDere12 25483566 25485116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1381 3 489 Cytochrome P450 AT5G42650 53.074 1.51e-179 512