Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1379 ATGGCGTACCAGACTCCGGATCGCGACTCAGAATCGGGATTGCAAACCCCAACGCGCCTCTACAACCCCTACAAGGACCTCGAGGTCCCTATGCGAAATCTCTACCAGCTTCCGACCTCCCCTGAGTACCTTTTCGTCGAAGAGGCTCGCCGAAAGCGCCGATCGTGGGGTGAGAACCTCACCTTCTACACTGGCTTCGGCTACCTCGCCGGCGCCGTTGGTGGCGCGGGAGTGGGACTCGTCGATGGCTTCAAATCCTTTGAGTCTGGCGACACCGCGAAGCTCCGGATTAACCGGGTCCTAAACGCGTCCGGTCATGCGGGTCGGGTTTGGGGCAACCGACTTGGTGTGATCGGGTTAATGTATGCCGGCATCGAGAGTGGGATTCAGGCCGTGAGGGATACTGATGATGTCTGGAATAGTATGGCGGCGGGGCTTGGCACGGGTGCATTGTATCGAGCCGCGAGAGGGGTGAGATCAGCTGCGGTGGCGGGAGCCGTTGGTGGAGTTGTGGTAGGAGCTGCTGTGATGACGAAGCAGGCATTGAAACGCTACGTGCCGATATGA 567 0.5926 MAYQTPDRDSESGLQTPTRLYNPYKDLEVPMRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGFGYLAGAVGGAGVGLVDGFKSFESGDTAKLRINRVLNASGHAGRVWGNRLGVIGLMYAGIESGIQAVRDTDDVWNSMAAGLGTGALYRAARGVRSAAVAGAVGGVVVGAAVMTKQALKRYVPI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1379 188 PANTHER TIM23 32 176 IPR045238 GO:0022857
Dere12g1379 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 63 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1379 Dere-ChrDere12 25470202 25470768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1379 10 188 Chloroplast and Mitochondria Gene Families AT1G72750 68.132 4.40e-78 229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1379 12 25470202 25470768 Dere11g1484 11 27368620 27369186 CCT