Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1374 ATGAGTTTGAGTGCGGCCGAGGAAGAATCGGGTCAAGAGATTCATATCCCGGCCGATATTGATTGGCAAATGCTTGATAAATCGAAGTTTTTCTTCCTTGGGGCTGCCCTTTTCTCAGGGGTTTCAGCGACCCTTTACCCTGTGGTAGTGTTGAAAACCCGGCAGCAGGTAGCTCAATCCCAAGTTTCTTGCATCAAAACTGCAATTTCACTGGTTAGGCATGAGGGCTTTCGAGCATTGTACAGAGGATTTGGGACTTCTTTGATGGGTACAATCCCAGCTCGAGCACTGTACATGGCTGCCTTGGAGATTACCAAGAGTAATGTAGGGACTGCTACAGTTAGGCTAGGAATTGCTGAACCAACTGCAGCAGCTATTGCCAATGCAGCAGCAGGTCTGAGTGCAGCCATCGCAGCTCAACTTGTGTGGACCCCTATTGATGTTGTGAGCCAGAGGTTGATGGTCCAAGGCGGTTGTAATAATTCTAACAATCCTAAGGTTAATTCAGCACGCCATTACATCAATGGGATTGATGCCTTCAGGAAAATTCTCAACACTGATGGTCCCAGAGGCTTGTATAGGGGGTTTGGGATATCCATTTTGACTTATGCTCCTTCAAATGCAGTTTGGTGGGCTTCATACTCTGTAGCACAAAGGCTAATTTGGGGTGGAGTCGGGTACTATTTATGCAAGAAAGATGATGCAAGCAAGAGTACTACTGCTAACACATTGAGGCCAGATTCAAAAACGGTAATGGCAGTTCAGGGAGTTAGTGCAGCAATGGCTGGTGGTATGTCTGCTTTAATTACCATGCCGTTGGATACAATCAAAACAAGACTACAGGTCTTGGATGGTGATGAAAATGGCCGCCGAGGACCAACAGCTATGCAGACAGTGAGGAACTTGGTTAAGGAAGGTGGTTGGATGGCTTGTTACAGAGGGTTGGGACCTCGGTGGGCTTCCATGTCAGTGTCTGCAACGACAATGATCACTACCTACGAGTTTCTGAAACGGCTTTCCACAAAAAACCAGGAGCATTTGACATGA 1047 0.469 MSLSAAEEESGQEIHIPADIDWQMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCIKTAISLVRHEGFRALYRGFGTSLMGTIPARALYMAALEITKSNVGTATVRLGIAEPTAAAIANAAAGLSAAIAAQLVWTPIDVVSQRLMVQGGCNNSNNPKVNSARHYINGIDAFRKILNTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRLIWGGVGYYLCKKDDASKSTTANTLRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTAMQTVRNLVKEGGWMACYRGLGPRWASMSVSATTMITTYEFLKRLSTKNQEHLT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1374 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 345 - -
Dere12g1374 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
Dere12g1374 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Dere12g1374 348 Pfam Mitochondrial carrier protein 37 108 IPR018108 -
Dere12g1374 348 Pfam Mitochondrial carrier protein 125 221 IPR018108 -
Dere12g1374 348 Pfam Mitochondrial carrier protein 253 343 IPR018108 -
Dere12g1374 348 SUPERFAMILY Mitochondrial carrier 23 336 IPR023395 -
Dere12g1374 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 250 339 IPR018108 -
Dere12g1374 348 PRINTS Mitochondrial carrier protein signature 259 281 IPR002067 GO:0055085
Dere12g1374 348 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Dere12g1374 348 PRINTS Mitochondrial carrier protein signature 31 44 IPR002067 GO:0055085
Dere12g1374 348 PRINTS Mitochondrial carrier protein signature 193 211 IPR002067 GO:0055085
Dere12g1374 348 Gene3D Mitochondrial carrier domain 29 347 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1374 Dere-ChrDere12 25444757 25445803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1374 1 345 Chloroplast and Mitochondria Gene Families AT1G72820 75.000 0.0 529