Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1371 ATGTATTTGCAACAAATTGGGCAGTCTAGATCCTCTAATGGATATGGCCGTCGAAAATCTGAAAGAGTAGGGACAACTAAGTCAGAGAATAAGATTTTATCTGGGAAGTCAAATGCCAACAGACTGGCAAGTACAGGGGCAGTGACTGGGAATATAGTTGAGGGCCCTTCACGTGATCGACTAGTATATATAACAACATGTCTTATTGGGCAGCAGGTGGAAGTCCAGGTGAAAAATGGATCTGTATACTCTGGAATATTTCATGCAACAAATACTGAAGAAGATTTTGGAATCATTTTGAAGATGGCTCGCTTGACAAAAGATGGTTCTTTGCGTGGGCAGAAGTCTGGTGTAGAATCAGTCAGCAAGGCTCCTTTAAAGGCTCTAATTATACCTGCCAAAGAACTTGTACAAGTCATTGCTAAGGGCGTTGCTGTTACTAGGGATAGCCTACCTAGTGAAGCTCACCATGAAATGCGTCAGGAGATCATGGTTGATTCAGTAATATCACAATCTCGTCATGTTGACTTAGAGAGAGAACTTCAACCCTGGGTGCCTGATGAAGTTGATCCACAGTGCCCTGAACTGGAAAATATCTTTGATGGCCCTTGGAATAGGGGCTGGGATCAGTTTGAAACAAATGCAACATTGTTTGGTGTAAAAAGCACGTTCAATGAGGAACTTTATACAACAAAGCTTGAGAAAGGACCTCAGACAAGAGAGTTGGAAAAGCAAGCTTTAAGAATAGCAAGAGAAATTGAGGGTGAGGATACCCAAGATCTCCATCTAGCAGAGGAAAGAGGCCTTTATCTACATAAGAATTTAGATATTGATGAAGAGACTCGATTCTCTTCAGTCTATAGGGGTGAAGGGGTTGATGACAGTGGATTTGATGAAAATGAGGACCTTCTGTCGGATTCGCACAATTCTGAAACCTTTGGTAGTACATTTGCTTCAGTCATAACAAGATCTGGTGAATTAAGTGGTGGAAAAGGCAATGATGGAGCTAGAACATCATTAAATTCCTCCTCTATGGATTTCCCACAATCATCTCAGTCAAGTACTGGTGTGGACTTAAGCCGTTCTGGTTCTCACAACCATGCTAATCAGTTAGCATCTGAACTCCCTGCCAAAAGTGACCCAACCTTGGATGTTGAAAGCAGGATTCAGGATAACTCGCCTAATGATCTGCATGGAGCCAATGACAATAGCAAGGAAGAAAATCAGATGCAAGCTGGGGACGTTCAACAGTCAAAATCTGAGGATTTACAATCATCACTCAACTCGAATAAAGATGACCCTGATACAAGGGGATTTTCTCTGAATACCACCACTTATGCCCCTGCATCTCATATTTTATCCAAGACTCCTGAACAGACAGCTTTGCCTGGTGATTTGATTGAGGGTTCACCATCTGGCAAAGGTAAATGGGAAACAAATCCTTTAAACTCCCTTGGAAGAACTGTTAGTTCCGGTTCAGATGGTGTTAGAGGTGTTACAGCATCTTCCGGCCCTGGTCTTTCACCAAGTTCTTCAGTTGGTTCATTATCTACTGAGAAGTCAACTCTGAACCCCAATGCAAAGGAATTCAAGCTCAACCCTAATGCAAAGAGTTTCATTCCATCCCAAACACCTGTTAGGCCTCCCTCCCAGGTGTCAGATGGTTCCTTCTATTACCCAAATACTGTAACTACTGTACCACATATGCCAGCCATGCATGTAGATATTGGAATGGGACCTGCATTTGCTGGGCCACAACCTGTCCTATATAATCCACAGGTAGCACAGATGCCATCACAAGCATATTTCCATCCAAATGGACCACAGTATGGGCAGCTCCTTGGTCATCCTAGGCCAGTTTTGTACATGCCAGGTTATCTGCCTGAAACACCATACAAGGGACGGGATTACTGA 1914 0.431 MYLQQIGQSRSSNGYGRRKSERVGTTKSENKILSGKSNANRLASTGAVTGNIVEGPSRDRLVYITTCLIGQQVEVQVKNGSVYSGIFHATNTEEDFGIILKMARLTKDGSLRGQKSGVESVSKAPLKALIIPAKELVQVIAKGVAVTRDSLPSEAHHEMRQEIMVDSVISQSRHVDLERELQPWVPDEVDPQCPELENIFDGPWNRGWDQFETNATLFGVKSTFNEELYTTKLEKGPQTRELEKQALRIAREIEGEDTQDLHLAEERGLYLHKNLDIDEETRFSSVYRGEGVDDSGFDENEDLLSDSHNSETFGSTFASVITRSGELSGGKGNDGARTSLNSSSMDFPQSSQSSTGVDLSRSGSHNHANQLASELPAKSDPTLDVESRIQDNSPNDLHGANDNSKEENQMQAGDVQQSKSEDLQSSLNSNKDDPDTRGFSLNTTTYAPASHILSKTPEQTALPGDLIEGSPSGKGKWETNPLNSLGRTVSSGSDGVRGVTASSGPGLSPSSSVGSLSTEKSTLNPNAKEFKLNPNAKSFIPSQTPVRPPSQVSDGSFYYPNTVTTVPHMPAMHVDIGMGPAFAGPQPVLYNPQVAQMPSQAYFHPNGPQYGQLLGHPRPVLYMPGYLPETPYKGRDY 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1371 637 MobiDBLite consensus disorder prediction 476 553 - -
Dere12g1371 637 MobiDBLite consensus disorder prediction 1 36 - -
Dere12g1371 637 MobiDBLite consensus disorder prediction 386 457 - -
Dere12g1371 637 Pfam LsmAD domain 218 288 IPR009604 -
Dere12g1371 637 SMART LsmAD_2 218 289 IPR009604 -
Dere12g1371 637 Gene3D - 65 122 - -
Dere12g1371 637 MobiDBLite consensus disorder prediction 288 311 - -
Dere12g1371 637 PANTHER ATAXIN 2-RELATED 34 629 IPR045117 GO:0003723
Dere12g1371 637 MobiDBLite consensus disorder prediction 334 376 - -
Dere12g1371 637 Pfam Ataxin 2 SM domain 58 142 IPR025852 -
Dere12g1371 637 MobiDBLite consensus disorder prediction 324 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1371 Dere-ChrDere12 25408288 25415372 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1371 12 25408288 25415372 Dere11g1464 11 26988122 26991173 CCT
Dere12g1371 12 25408288 25415372 Dere12g1371 12 25408288 25415372 ECH