Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1356 ATGATGAGTACTGCAAGAAATAGGCCTCCTTTCACGGCTGCTCAGTGGCAAGAACTTGAACAACAAGCTCTTGTTTTCAAATACATGGTCTCAGGGACACCTATCCCCCCTGATCTCATTTACTCCATTAAAAGAAGCTTAGACTCTTCATTATCTTCGAGGCTCTTCCCTCACCACCCCATTGGATGGGGATGTTTTGAGATGGGATTTGGGAGAAAGGTAGACCCAGAGCCGGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCATACCCAGATTCAAAGTATTGTGAAAAACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCATCAACAAGCAGCATTACCACAAACACCTCGCAAGCAATGTCATCATATAGCCTTAACAGAGGCCTTTCCATGATAAGCAGCAACCCCAGTAATAACAACACACCCTCAATCTCATCTTCTTTTCCTTTCTCTGAATCATCATCCCTATATCCTTACCAAAATTCTTCTCTTAATCCCTTCTTTTACACCCATTCAACCTCTTCTAGACCTCCTGATTCTGATTTTTCATCTCAAAACAACACTACCCCCCAGCTATTTTTGGACTCCGGATCTTATTCTCAGGGCGAAAAAGACTATAGGCATATTCATGTGGACGAAAGGGCATTTTTCCCAGAAGCTTCAGGGTCTGCTAGAAGCTTCCCTGACTCATACCAACAGTTATCTATGAGCTCCTACAATAAATCCTATTCAAACTCTCACCAGTTTCAGAACCTCTGTGATAATGACAGTAATCCAAGACAACAAGAAGAAGAGCAACATTGTTTTGTTCTAGGCACTGACTTCAAATCAGCAAGACCAAGCAAAAGTGAGAAAGAGAGTGGTAGTACCGAGACTACCCAGAGACCACTTCACCACTTCTTTGGGGATCAGTGGCCTCCAAAGAACACAGATTCTTGGCTTGATCTCGCTTCCAACTCCAGAATCCCCGCAGTGGATACAGCCGAAAGAGAGAGAGAGACGGAGATAGAAGATGAAAGTTTGGTGGCTAGGGAGGCTTTCTTTTGCTCAATCTCTTTAGATAGTACAGCAGAACATCACACTCACTACCAAAGCAAAGCATTGATTTTATTTCAGCGAGTTCAATATCAGCAAACAGGCCGATCTTCTTCCCTCCGTTCATCCGGTGCGGCGGGATCGGCGGGGGCGGCGGGGGCCGCCTATTGTGCCGACGACTGGGCCTTGGCGGTGACTTTCTGTCTTTTGGTCCATGGCTCTCATGAGGATGATGCCGCGGCGGAGCAGGAGAACGATGAGGCCGCGGTGTTGAAGAGGACGATGGTGATCGCAACAGTGAAGATGATGCTGGTGGCTCACAATACAAAATCCTTGCCTCCCAAGAGAACTGCAATTGATGCAGAATCCGCACGTACGATCTCTTGGAATCAGGACATTTCCAGCTCCAGCTTCCTCCTCTCTAAAGTATTCGAAGAATTCGATCAAATGGGTTTGCCCCCAAATCCTCGCCTCGTTCCTCTTCCGCAGAGGAGGAACAAACCCACAGCCCCAAGATTTGACACGAGATTTCTAGGGTTTTGTTCTTATGCCCCAGAAAAATGTGGGACCTGA 1650 0.4661 MMSTARNRPPFTAAQWQELEQQALVFKYMVSGTPIPPDLIYSIKRSLDSSLSSRLFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGRNRSRKPVEVSSSTSSITTNTSQAMSSYSLNRGLSMISSNPSNNNTPSISSSFPFSESSSLYPYQNSSLNPFFYTHSTSSRPPDSDFSSQNNTTPQLFLDSGSYSQGEKDYRHIHVDERAFFPEASGSARSFPDSYQQLSMSSYNKSYSNSHQFQNLCDNDSNPRQQEEEQHCFVLGTDFKSARPSKSEKESGSTETTQRPLHHFFGDQWPPKNTDSWLDLASNSRIPAVDTAERERETEIEDESLVAREAFFCSISLDSTAEHHTHYQSKALILFQRVQYQQTGRSSSLRSSGAAGSAGAAGAAYCADDWALAVTFCLLVHGSHEDDAAAEQENDEAAVLKRTMVIATVKMMLVAHNTKSLPPKRTAIDAESARTISWNQDISSSSFLLSKVFEEFDQMGLPPNPRLVPLPQRRNKPTAPRFDTRFLGFCSYAPEKCGT 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1356 549 MobiDBLite consensus disorder prediction 104 133 - -
Dere12g1356 549 ProSiteProfiles WRC domain profile. 75 119 IPR014977 -
Dere12g1356 549 PANTHER GROWTH-REGULATING FACTOR 5 9 330 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dere12g1356 549 MobiDBLite consensus disorder prediction 292 306 - -
Dere12g1356 549 MobiDBLite consensus disorder prediction 184 212 - -
Dere12g1356 549 SMART QLQ_2 9 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere12g1356 549 MobiDBLite consensus disorder prediction 116 133 - -
Dere12g1356 549 MobiDBLite consensus disorder prediction 285 316 - -
Dere12g1356 549 ProSiteProfiles QLQ domain profile. 10 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere12g1356 549 MobiDBLite consensus disorder prediction 184 213 - -
Dere12g1356 549 Pfam QLQ 10 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere12g1356 549 Pfam WRC 76 118 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1356 Dere-ChrDere12 25201873 25209941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1356 8 319 GRF Transcription Factor Family AT3G13960 39.730 5.21e-67 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dere12g1356 WRC 4.3e-21 No_clan