Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere12g1343 | ATGCCAGAGCTTGCTTTATTACCTAAGGAGTTTTGTTGGTTTTGTTTCATGGTTAATAATGGCTTTGATGCATCGGCTGGTGTGAAGTCAGGTTTAAATCTTGAGGGTGAGATTTCACCTGCAATAGGAGAGGAGGAGTTTGCTTCGAGCAAACAATGCTCTATTTTCCACATTGCCATCTATATTACAAACAAATCTGCTTGTAAACTAAAATTAGGAGATCTCAAAGGAGCATTGCTAGATACAGAATTTGTAATGCGTGATGGAGATGACAATGTCAAGGCTTTATTCCATCAAGGACAGGCATACATGGCACTTAATGACATTGATGTGGCAGTTGAAAGCTTTAAGAAGGCAGTGATCTTAGAGCCAAATGACGCTGGAATCAAAAAGGAACTTGCTGCTGCTGCTTGCTCTACTTAA | 423 | 0.3995 | MPELALLPKEFCWFCFMVNNGFDASAGVKSGLNLEGEISPAIGEEEFASSKQCSIFHIAIYITNKSACKLKLGDLKGALLDTEFVMRDGDDNVKALFHQGQAYMALNDIDVAVESFKKAVILEPNDAGIKKELAAAACST | 140 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere12g1343 | 140 | SMART | tpr_5 | 93 | 126 | IPR019734 | GO:0005515 | |
Dere12g1343 | 140 | Pfam | Tetratricopeptide repeat | 94 | 126 | IPR013105 | - | |
Dere12g1343 | 140 | Gene3D | Tetratricopeptide repeat domain | 29 | 139 | IPR011990 | GO:0005515 | |
Dere12g1343 | 140 | PANTHER | ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED | 63 | 134 | IPR039663 | - | |
Dere12g1343 | 140 | ProSiteProfiles | TPR repeat region circular profile. | 93 | 126 | - | - | |
Dere12g1343 | 140 | SUPERFAMILY | TPR-like | 59 | 136 | IPR011990 | GO:0005515 | |
Dere12g1343 | 140 | ProSiteProfiles | TPR repeat profile. | 93 | 126 | IPR019734 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere12g1343 | Dere-ChrDere12 | 24887355 | 24888562 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere12g1343 | 37 | 132 | Calmodulin-binding Proteins | AT3G25230 | 39.583 | 2.40e-10 | 55.5 |