Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1334 ATGGTTCTCAAAAGGGGAATAACTATAGAAGCACGTCGAATCGCAACTGCTATTATATTTTACCTTTCTCCCATCGAAGAAAATAGGAAAATAACTGGAGAAAACCCAGAAGTAATCCCAGCTTTGGTAGAACTAATCAAGGAAGAAACAACCACTTACAGGAAAAAGAATGTCATGGTTACCATTTTCGGGCTTCTCTTGCTTCCTCAGAATCATCAGAAAGTGCCGGAGGCTGATATTGTTCCTGTGTTAGTCAGTATATTAGCTTCCTCAAAAAAATCTGACCTTAGCGCAGATTGTTTAATGGTTCTCTCAGCCTTGGCGGAGAATGTAGAGGGAGCAAAAGCTATATCACAAGCTTCTGCTTTGCCTTTGATCATTAGGATGAAAGGTGTTGATCTACAAACAACCTTCATTCGAAAGCGGAGATCGTTGCTTTCAGTCTGCACTTCTCCAATATCAATTGTTAGAAGTGGCTACCTCCTTTGTCCTTTCTGCCCCTCACTATCTTCAAGCTCATTTCCCTTCCCTCCTGAAGCTCTGCTCCCCACTCCCTCTCTCTTTTGTCTTTTTCCTTTCCTTTGA 585 0.4188 MVLKRGITIEARRIATAIIFYLSPIEENRKITGENPEVIPALVELIKEETTTYRKKNVMVTIFGLLLLPQNHQKVPEADIVPVLVSILASSKKSDLSADCLMVLSALAENVEGAKAISQASALPLIIRMKGVDLQTTFIRKRRSLLSVCTSPISIVRSGYLLCPFCPSLSSSSFPFPPEALLPTPSLFCLFPFL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1334 194 Gene3D - 8 136 IPR011989 -
Dere12g1334 194 PANTHER U BOX DOMAIN-CONTAINING 2 129 - -
Dere12g1334 194 SUPERFAMILY ARM repeat 10 129 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1334 Dere-ChrDere12 24672129 24673067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1334 2 129 U-box Gene Family AT1G10560 33.077 1.45e-19 84.0