Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1333 ATGCTACATAAATACCTCAACGACCCACACAAACTGCCACCACAAATTTTCACAAATCAAACCCAGCACACATTATTAGCAATGGAACTAGCAGTTCCTTCTTGGGTTTCGACGGCAGCCGCATGGCTCGCAACCTTCGCAGTCGTCCTCCTCTTCAGCCGCCGTCTCCGCCGCAGGAGATACACCTTGCCGCCGGGCCCAAAACCGTGGCCCATCATCGGCAACCTCAACCTCATAGGCTCACTCCCTCACCGGTCCATCCACGCACTGTCCCAAAACTATGGCCCCATCATGCACATCTGGTTCGGGTCGAACCCGATCGTGGTGGGCTCCTCCGTGGAAATGGCCAAAGCCTTCCTCAAAACCCACGACGCCACCCTTGCCGGCCGCCCCAAGTTCGCCGCCGGCAAGTACACCACCTACAACTACTCCGACATCACATGGTCCCCTTACGGCCCATACTGGCGACAAGCTCGCAGAATGTGCCTGATGGAACTGTTCAGTGCGAAACGATTAGAGTCCTATGAGTATATCAGAAAGGAGGAACTGAAAGCTCTGCTTAAGGAGTTGAATGATTCTGCGAATACAACTATAGTGTTGAAAGATCACCTTTCTACTTTGAGCCTTAATGTTATAAGCAGGATGGTGTTGGGGAAGAAGTACACGGAAAAGAGCGAAAACGCCATCGTTTCGCCGGAGGAGTTCAAGAAGATGCTGGACGAGTTGTTCTTGCTGAATGGTGTGTTGAATATTGGGGACTTTATTCCTTGGATCGATTTTCTGGACTTGCAGGGTTATATCAAGAGAATGAAGGCTTTGAGCAAGAAGTTCGATAGGTTTATGGAGCATGTGTTGGATGAACATAATGAAAGAAGAAAGGGAGTGAAGGATTATGTGGCCAAAGACATGGTGGATGTGCTTCTTCAGCTAGCAGATGATCCCACTCTGGAGGTCAAGCTTGAGAGGCATGGAGTCAAAGCTTTCACTCAGGACTTGATAGCTGGAGGGACAGAAAGCTCAGCAGTAACGGTAGAATGGGCAATTTGTGAGTTACTGAGGAAGCCAGAGATCTTCAAGAAGGCAACAGAAGAGCTCGACAAGGTGATTGGAAGAGAGAGATGGGTCGAAGAGCAGGACGTTCCCAACCTACCCTACATCAATGCGATAGCAAAAGAGACCATGAGGCTCCACCCTGTGGCTCCCATGTTAGTACCCAGACTAGCCAGGGAAGACTGCAAGGTCGCGGGCTACGACATCCCCAAGGGCACTCAGATCCTTGTGAACGTGTGGACCATTGGAAGAGACCCTACTATCTGGGACAACCCTAATGAGTTCGAACCAGAGAGGTTCTTAGGGAAGGAAATTGATGTTAAAGGCCATGACTATGAACTGTTGCCTTTTGGTGCAGGCAGAAGGATGTGCCCAGGGTACCCTCTCGGCCTTAAGGTCATTCAGGCAAGCTTGGCCAATCTCTTACATGGCTTCCACTGGAGACTGCCAGGGAATACGAAGAAAGAGGAGCTGGATATGGAGGAGATTTTTGGACTCTCTACCCCTAAAAAGCTGCCTCTCGAAACTGTTGTGGTGCCCAGACTTCCTGCTCATCTTTTTTCTCTTTGA 1620 0.5012 MLHKYLNDPHKLPPQIFTNQTQHTLLAMELAVPSWVSTAAAWLATFAVVLLFSRRLRRRRYTLPPGPKPWPIIGNLNLIGSLPHRSIHALSQNYGPIMHIWFGSNPIVVGSSVEMAKAFLKTHDATLAGRPKFAAGKYTTYNYSDITWSPYGPYWRQARRMCLMELFSAKRLESYEYIRKEELKALLKELNDSANTTIVLKDHLSTLSLNVISRMVLGKKYTEKSENAIVSPEEFKKMLDELFLLNGVLNIGDFIPWIDFLDLQGYIKRMKALSKKFDRFMEHVLDEHNERRKGVKDYVAKDMVDVLLQLADDPTLEVKLERHGVKAFTQDLIAGGTESSAVTVEWAICELLRKPEIFKKATEELDKVIGRERWVEEQDVPNLPYINAIAKETMRLHPVAPMLVPRLAREDCKVAGYDIPKGTQILVNVWTIGRDPTIWDNPNEFEPERFLGKEIDVKGHDYELLPFGAGRRMCPGYPLGLKVIQASLANLLHGFHWRLPGNTKKEELDMEEIFGLSTPKKLPLETVVVPRLPAHLFSL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1333 539 PANTHER CYTOCHROME P450 98A9 39 537 - -
Dere12g1333 539 SUPERFAMILY Cytochrome P450 64 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 CDD CYP71_clan 95 524 - -
Dere12g1333 539 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 FunFam Cytochrome P450 84A1 55 532 - -
Dere12g1333 539 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 Gene3D Cytochrome P450 56 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 Pfam Cytochrome P450 64 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1333 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1333 Dere-ChrDere12 24655869 24658829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1333 46 539 Cytochrome P450 AT5G07990 43.114 4.57e-145 426