Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1314 ATGGAGCCGCCACCGGAGAATGCTGGGTTAGCATTTAAAACGGCGGAGAAGATTATACTCCGGTGGGACTCCACGGCGTCTGAAGAAGCCCGAGAAAAGATGATCTTCGAAGGCGACCGTCAAGAGGTTGATCGCTATTTGCTGGCTGTCGATGAAATCCAACGCTCCTTGTCTTCCACTTCCATCTCCGATAGTGACCAAGACAAAGTCAACTCTGCTATTCAGATCGCCATGGCTCGTCTCGAAGACGAGTTTCGTAACATTCTTATTTCTCACACCAACCCTATCGAGACCGATTCGTTGACCGATCCTAGCTCTTCAATTTACTCTGCTTCTTCGGTTACTGCGGGAGCTGAGCTGGACGATGATACTAATGTTGAAGAAGAAGAGGATGCTTCGATTATCAAAAGCGGCGAGCTTCTTCGCTATAACAGCGATGGTTCCAGCGTTGCTAATACTAGCTACCGATCCACCAGTAGTATTCGCGAGATCGATCTGATACCTTCTGATGCTATTTACGACCTTCGATGCATCGCTGAGCGAATGATCTCATCTGGATACCTACGTGAGTGCATCCAGGTTTATGGTAGTGTGAGGAAATCAGCTGTTGATGCGAGCTTTCGGAGACTCGGGATCGAGAAGCTGAGCATCGGTGATATTCAGAGGTTGGAGTGGGATCTGCTTGAGACTAAGATCCGACGGTGGATAAGGGCTGCTAAGGTTTGTATTAGGACATTGTTTGCTAGCGAGAAGAAGCTCTGTGAGCAAATCTTTGATGGGCTGGAGACTGCAATTGATGATGCCTGCTTTATGGAGACAATTAAAGGTCCAGCAATTCAGCTCTTCAATTTCGCTGAAGCTATCAGTATAAGCAGGAGATCCCCTGAGAAGTTGTTCAAGATGTTAGACCTTCATGATTGTTTGATGGATTTGATTGCTGATATTGATATTGTGTTTGATTCCAAGTCTTCAGAGTCCATTCGTATTCAAGCTGCGGAGATACTATCTCGGTTGGCTGAGGCAGTAAGAGGGATATTATCTGAGTTTGAGAATGCTGTTCTTCGTGAACCATCCAAGGTTCCTGTTCCTGGTGGGACGATTCATCCTTTGACAAGGTATGTCATGAACTATATAAGTTTGATCTCTGATTACAAGCAGACACTGAATGAGCTTATAGTGTCTAAACCATCGACGGGGTCAAGGTACTCCGGCGATCCTTCAACCCCTGATATGGATTTTGCTGAACTGGAGGGGAAGACCCCATTGGCTGTTCACTTGATTTGGATAATTGTGATATTGCAATTCAACTTAGATGGCAAGTCCAAGCATTACAAGGATGCATCTTTGTCTCACTTGTTCATGATGAACAATGTTCACTACATTGTTCAGAAGGTTAAAGGATCTCCGGAATTGAGGGAGATGATTGGAGACGATTATCTAAAGAAGCTAACTGGGAAATTCCGGCAGGCAGCTACTAGCTACCAGAGAGCAACTTGGGTGAGGGTATTGTATTGTTTGAGGGATGAGGGATTACATGTGAGTGGTGGTTTTTCTTCCGGGGTCTCAAAAAGTGCTTTGAGAGAAAGGTTCAAGTCCTTCAATGCTATGTTTGAGGAGGTTCATAGAACCCAAGCAACCTGGTTGATTCCAGATTCTCAACTCCGGGAGGAGCTTCGGATATCCATATCAGAGAAGCTGATTCCAGCATATAGATCGTTCCTTGGGCGGTTTAGGAGTCATATAGAGAGTGGAAGGCATCCAGAAAACTACATTAAGTATTCAGTTGAGGACCTGGAGAACGATGTTTTGGATTTTTTTGAAGGATACCCTCTTTCCCAGCACTTGAGGAGGAGATCTCAGTGA 1863 0.453 MEPPPENAGLAFKTAEKIILRWDSTASEEAREKMIFEGDRQEVDRYLLAVDEIQRSLSSTSISDSDQDKVNSAIQIAMARLEDEFRNILISHTNPIETDSLTDPSSSIYSASSVTAGAELDDDTNVEEEEDASIIKSGELLRYNSDGSSVANTSYRSTSSIREIDLIPSDAIYDLRCIAERMISSGYLRECIQVYGSVRKSAVDASFRRLGIEKLSIGDIQRLEWDLLETKIRRWIRAAKVCIRTLFASEKKLCEQIFDGLETAIDDACFMETIKGPAIQLFNFAEAISISRRSPEKLFKMLDLHDCLMDLIADIDIVFDSKSSESIRIQAAEILSRLAEAVRGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKQTLNELIVSKPSTGSRYSGDPSTPDMDFAELEGKTPLAVHLIWIIVILQFNLDGKSKHYKDASLSHLFMMNNVHYIVQKVKGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKSFNAMFEEVHRTQATWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLENDVLDFFEGYPLSQHLRRRSQ 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1314 620 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 608 IPR004140 GO:0000145|GO:0006887
Dere12g1314 620 ProSiteProfiles Sox C-terminal domain profile. 1 115 IPR021934 -
Dere12g1314 620 Pfam Exo70 exocyst complex subunit 234 600 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dere12g1314 620 ProSiteProfiles ADF-H domain profile. 1 75 IPR002108 GO:0003779
Dere12g1314 620 Gene3D Exocyst complex component Exo70 18 120 - -
Dere12g1314 620 Gene3D Exocyst complex component Exo70 121 616 - -
Dere12g1314 620 SUPERFAMILY Cullin repeat-like 29 607 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1314 Dere-ChrDere12 24477048 24478910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1314 11 620 EXO70 exocyst subunit family AT1G72470 70.288 0.0 850