Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1311 ATGGCCGTAGCTCCGGCGTCTATCCGGCCAAGTATAATCTTTTTCTCCGTCTTCATCGTCATATTTCCCACCTCAAATTCTTTGTCAGAAGCCGAAGCGTTGCTCAATTTCAAGAAGTCCTTGACCAATATCGAAGGCCTTGGTAGTTGGGTCCCCAACTCTTTACCTTGTAACAAAACGAACCCATGGGATGGAATTCTGTGCTACAAAGGCATTCTCACGGGGCTTCGCCTCGAGAATATGGGGCTATCGGGGAAAATAGACATCGACGCGTTGCTCGAACTCAGGGATCTTCGAATTATTAGCTTCGGGAAGAATTCATTCTCTGGTTCGTTCCCCGAGTTCAATCGATTATGGCTTTTGAGATCCATATCTTTGTCGGGAAATCAGTTTTCAGGTGAGATTCCTTTGGATTACTTCACGAAAATGGGAAACCTGAAGAAACTGTGGTTGAATGATAATAATTTCACGGGTCAAATTCCATCCTCTCTAACTCAAGTTCCACAACCTATTGAGTTACATCTCGAAAATAATCAGTTTAGTGGAAGCATTCCGAATATAAATAAACCCTCGTTAGCGAAATTCAATGTGTCGAACAACAATTTGGAGGGTGAAATCCCACCTGGCTTATCCAAATTCGACAGGAGTTCATTTGATGGGAATTCTAAGCTTTGTGGAGAGAAGTTAGGGAAATCTTGCGAAAATTCACAGAACAGTAAGCTTAGCTCAGCGAAGATTGCCGTCATAGTTGCATCAACAGTAGCAGTTGTCTCACTGCTTATTGTAGTTGCTGTGAGATCAAGGAAAAAGGAAAAGAAATTTGATACGCTTGGAAAGGAAAATAGAATAGAAAATAAAGAAGAGGCCGTTGAAGTTCACGTAGCTACTATACCTGTTAAAAAACAAGTACCTCCAACCCGGAAAATGAGCTCCGGCAGGAAGGGATCCTCCCGCGGTGGCGGCTTCGGGGATCTTGTGATGGTGAATGACCAGAAGGGTTGTTTTGGGTTGGAGGATTTGATGAGGGCATCTGCAGAAGTGCTGGGAAACGGTGGGTTGGGATCTTCTTATAAAGCTGTGATGGCTAATGGGGTGGCAGTGGTGGCGAAGAGGATTAGGGAGATGAAAGCAGTAGGAAAAGATGTGTTTGATGCAGAGATGAGGAAGATTGGAAGTCTAAAACACTGGAATATATTGACCCCTTTGGCTTATCATTATAGAAATGAAGAGAAACTGGTGGTCTTTGAATACGTTCCCAAAGGCAGTCTACTCTATTTGTTGCATGGTGATCGAGGACCATCGCATGCCGAACTAGATTGGCTAGCTCGGTTGAAGATTGTGCAGGGAATTGCCGAAGGTTTGAGTTATCTTCATACAGAACTTCCCTCTGATTTACCACATGGCAATCTCAAGTCCAGCAACATTCTTCTTGGTCCGAGTTATGAGCCACTGCTTATGGACTATGGGTATAACTCCATGTTTAGCTCTCCCAATGTAACAACGCCAGCTCTCTTTGCTTACAAGGCTCCTGAAGTAGTGCAGGGTGGCGAAATTTCACCCAAGTGTGACGTTTTCTGTCTAGGAGTCGTCATTCTTGAACTCCTAACGGGGAAATTTCCTTCCCAATATCTCAGCAACGGGAAAGGTGGATTTGATGTAGTGCAATGGATTGGATCAGCAATTTCTGAGGGAAGTGAATCAGAACTGCTTGATCCAGAAATTGCAGGCTCTAAAGATTCGATTAGTGAAATGGTGAGACTCCTCCATATTGGTGCTGCTTGCACTGAAAGTAGCCCCGAGAAGCGATTAGACATGATGGAGGCCATTAGAAGGATAAAGGACATAAAAGCCGAGGTTGCCCAATAG 1866 0.4421 MAVAPASIRPSIIFFSVFIVIFPTSNSLSEAEALLNFKKSLTNIEGLGSWVPNSLPCNKTNPWDGILCYKGILTGLRLENMGLSGKIDIDALLELRDLRIISFGKNSFSGSFPEFNRLWLLRSISLSGNQFSGEIPLDYFTKMGNLKKLWLNDNNFTGQIPSSLTQVPQPIELHLENNQFSGSIPNINKPSLAKFNVSNNNLEGEIPPGLSKFDRSSFDGNSKLCGEKLGKSCENSQNSKLSSAKIAVIVASTVAVVSLLIVVAVRSRKKEKKFDTLGKENRIENKEEAVEVHVATIPVKKQVPPTRKMSSGRKGSSRGGGFGDLVMVNDQKGCFGLEDLMRASAEVLGNGGLGSSYKAVMANGVAVVAKRIREMKAVGKDVFDAEMRKIGSLKHWNILTPLAYHYRNEEKLVVFEYVPKGSLLYLLHGDRGPSHAELDWLARLKIVQGIAEGLSYLHTELPSDLPHGNLKSSNILLGPSYEPLLMDYGYNSMFSSPNVTTPALFAYKAPEVVQGGEISPKCDVFCLGVVILELLTGKFPSQYLSNGKGGFDVVQWIGSAISEGSESELLDPEIAGSKDSISEMVRLLHIGAACTESSPEKRLDMMEAIRRIKDIKAEVAQ 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1311 621 Gene3D Phosphorylase Kinase; domain 1 324 417 - -
Dere12g1311 621 Gene3D Ribonuclease Inhibitor 190 237 IPR032675 -
Dere12g1311 621 ProSiteProfiles Protein kinase domain profile. 342 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1311 621 SUPERFAMILY L domain-like 27 213 - -
Dere12g1311 621 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Dere12g1311 621 Gene3D Transferase(Phosphotransferase) domain 1 418 621 - -
Dere12g1311 621 SUPERFAMILY Protein kinase-like (PK-like) 346 611 IPR011009 -
Dere12g1311 621 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Dere12g1311 621 MobiDBLite consensus disorder prediction 302 321 - -
Dere12g1311 621 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 617 IPR046959 -
Dere12g1311 621 Pfam Protein kinase domain 345 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1311 Dere-ChrDere12 24454020 24456357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1311 11 615 Receptor kinase-like Gene Family AT3G42880 46.635 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere12g1311 Pkinase 2.5e-28 CL0016