Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1310 ATGAAGGTGGAGCCGAGGAGGCAGTCAAAACATGCTCGGGAAATTGCGTGGCTCCCATATATTCTTCTTCTCCCTCCCCACCTGTTCTTCCTCATTCCTCATGCTACCCACTTTCAACTGAATAGGGTTCGAACAGTCGCAGAAATTACTATTGTCAATCAACCTTCCCGGGTTCTTTGGTCTTCTCCTAAACCTTGTGGAGATTCTGAAAAGATGTCGAAATTCACCGACACGGCGGCGGTTGGCCGGAGATCCGGCAAGGCACCGGAGAGGTCCAACTTCACTCAGGCTTGTAACCTCTTGAGCCAGTTATTGAAGGAGAAACGAGGGTCTGGATCTTTAAGCCTCGGAACGGCTGGGAAAATGGAATCTGGAGACCCAGCAAGTACGAAGGACTTGTTAACAAACGTCGAAAATCCTGATGATACATTGAGACAAAATGCTTTAGCCATGGAATTTCTACCACAGTTAGTGGAAAACCCCTGCATCAAGAAGTCTGATACGAGGTCAGAGCCTGAAGCTCCCCAATTGACGATATTTTACGCTGGAAAAGTGTTAGTGTTTGATGCTTTTGCTCCTGAGAAGGCCACGGAGATCATGGAGCTGGCCACCAAGTTAAGCTCTGATAGTACTGATTCTGACATTGATAAGAAACCCCCAAGTGCTTCTAATTTTAAAGAGAAAATGGATGTGGCCAAAGTGCCTCAAAACAATACTGGCCAGGAAGTCCCTAGACCAGGACCCCAACCTATTAAGTCAGATATGAGATACCCAAGAAGAGCTTCCCTTCTAAAATTCCTTGAGAAGAGGAAAGAAAGGGTGATTGCTAAAGGACCTTACCAGCTGAACAATCCAAAGCAAGATGGAAGCAGTTCAGGAGGTGACCCTGATCAGTCTTCCAAATTCTTTGACCTCAACTTATAG 924 0.4621 MKVEPRRQSKHAREIAWLPYILLLPPHLFFLIPHATHFQLNRVRTVAEITIVNQPSRVLWSSPKPCGDSEKMSKFTDTAAVGRRSGKAPERSNFTQACNLLSQLLKEKRGSGSLSLGTAGKMESGDPASTKDLLTNVENPDDTLRQNALAMEFLPQLVENPCIKKSDTRSEPEAPQLTIFYAGKVLVFDAFAPEKATEIMELATKLSSDSTDSDIDKKPPSASNFKEKMDVAKVPQNNTGQEVPRPGPQPIKSDMRYPRRASLLKFLEKRKERVIAKGPYQLNNPKQDGSSSGGDPDQSSKFFDLNL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1310 307 MobiDBLite consensus disorder prediction 283 307 - -
Dere12g1310 307 ProSiteProfiles Tify domain profile. 170 205 IPR010399 -
Dere12g1310 307 MobiDBLite consensus disorder prediction 210 224 - -
Dere12g1310 307 Pfam tify domain 171 203 IPR010399 -
Dere12g1310 307 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 84 289 IPR040390 -
Dere12g1310 307 MobiDBLite consensus disorder prediction 206 258 - -
Dere12g1310 307 MobiDBLite consensus disorder prediction 275 307 - -
Dere12g1310 307 Pfam Jas motif 259 281 IPR018467 -
Dere12g1310 307 SMART tify_2 170 205 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1310 Dere-ChrDere12 24432170 24434907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1310 81 291 Tify Gene Family AT1G19180 34.599 6.92e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dere12g1310 tify 2.1e-15 No_clan