Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1295 ATGGGAGTAGGAGGAAGTAAGGTGAGGAAATGGGTTGGTGGGTCGAGTGGGTATGAGTATAAGCGCTTAGAAGAGCGTGTGTTGGGACGAAGAGGGTACGTTCCAGTTAGTGTTGGGATGGACGAGGAGAGTAGCCGGCGATTCATGGTTCATACGAAGGCTCTCAGGGATGCAGATTTCTGTGAGCTGCTCAGAGCATCAGCTGAGGAACTTGGGTTTCCCAATGATGGGGTTCTCAGAATCCTATATGAGGCACACCATTTTGAGGACTGGATCGTCTCCAGGTTCAAGGGAAGCACATTTCTCAGGGTCAAACCAATACGGACATCATACAGTTCTGTATACTGA 348 0.4943 MGVGGSKVRKWVGGSSGYEYKRLEERVLGRRGYVPVSVGMDEESSRRFMVHTKALRDADFCELLRASAEELGFPNDGVLRILYEAHHFEDWIVSRFKGSTFLRVKPIRTSYSSVY 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1295 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 90 IPR003676 GO:0009733
Dere12g1295 115 Pfam Auxin responsive protein 30 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1295 Dere-ChrDere12 24279355 24279702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1295 31 92 Calmodulin-binding Proteins AT2G24400 40.323 4.75e-07 44.3