Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1292 ATGATATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCAGTTCTTAAGTTCGCTTAGTACACCGGCGCCCATGCAATTGCAGGAAGGCACACTCCAGGAACATTTACTAATCAGCTCCAGACATCCTATAATGAGCCTCGCCTTCTCATTCTCACTGATCCAAGAACAGCCTATCAAGGAAACTGCACTTGGAAATATACCAACTATTGCTTTCTGTGACACTGATTCTCCCATGCGATATGTTGACATTGAGATTCCTGCCAATAATAAGGGCAAGCATAGCATTGGTTGTCTCTTTTGGCTTCTAGCAAGGATGCTTTTGCAGATGCGGGGTACCCTTCGTCCGGGGCACAAGTGGAATGTGATGGTGGACTTGTTCTTCTATAGAGAACCTGAGGAGGCTAAGCAACAAGAGGAGGACGAAACAGCTCCTCTCCAAGATTATGCCATTGCAGACTTAATGCTGATGCTATTAGTGGCCTTCCTGCTGATAGCCAGTGGCCTACCGCAATTGATCAACCATGGACTGATGCAGCTCCACAGCCTATTCCAGCCGTTCCTGGTGTCAACTGGGCCTCAGAAGCTGGCAGAGTCAGCTACATCATTTGTTGGTGGAGATTGGGATGAATCTGTTCCTGCTCCACAAATACCTGCCTCAGGAATTGACACTGTTCCTGCTTCTGGCTGGGAATAA 699 0.4764 MILLFSLPGLMVREQFLSSLSTPAPMQLQEGTLQEHLLISSRHPIMSLAFSFSLIQEQPIKETALGNIPTIAFCDTDSPMRYVDIEIPANNKGKHSIGCLFWLLARMLLQMRGTLRPGHKWNVMVDLFFYREPEEAKQQEEDETAPLQDYAIADLMLMLLVAFLLIASGLPQLINHGLMQLHSLFQPFLVSTGPQKLAESATSFVGGDWDESVPAPQIPASGIDTVPASGWE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1292 232 Pfam Ribosomal protein S2 59 106 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dere12g1292 232 SUPERFAMILY Ribosomal protein S2 56 126 IPR023591 -
Dere12g1292 232 PANTHER 40S RIBOSOMAL PROTEIN SA 56 216 IPR005707 GO:0003735|GO:0006412|GO:0015935
Dere12g1292 232 Gene3D - 22 145 - -
Dere12g1292 232 MobiDBLite consensus disorder prediction 212 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1292 Dere-ChrDere12 24259284 24260696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1292 31 151 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 65.289 1.23e-51 167