Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1281 ATGGCATGTTTAAGGATGTTGATGTACTTCCTGGTTTTCAATGTGATCGTTCTCATTCAAATCACTCACAGCCATAGCAAAGTCTGCCTACCAAAAAACCATGCAGCTTTGTTCATATTCGGAGACTCACTCTTTGATGTTGGAAACAATAACTACATCAAAACCATCCCTTTCCTTGAGGCAAACTACGATCCGTATGGCGAAACTTTCTTCAAGTACCCCACCAGAAGATTTTCCGATGGACGCGTCATCCCAGATTTCATTGTGATGAAATACCCTTCAAAATATGGTTTCAAAGTAGGGGATGTGGCTTGCTGTGGAGGTGGGCCATACGGAGGAGATTATAGCTGTGGAGGCAAAAGAGGGATTGAAGAATATGAGTTATGTGAGAATGTTGAAGAATATGTGTTCTTTGATGCTATTCATCCTACACAGATTGCTGCTCAACATTATGCCAACCTCATGTGGAGTGGAAACACTGATTTCACTCACCCTTACAATCTGAAACAACTCTTTGAATTTGAAGTTTGA 531 0.4105 MACLRMLMYFLVFNVIVLIQITHSHSKVCLPKNHAALFIFGDSLFDVGNNNYIKTIPFLEANYDPYGETFFKYPTRRFSDGRVIPDFIVMKYPSKYGFKVGDVACCGGGPYGGDYSCGGKRGIEEYELCENVEEYVFFDAIHPTQIAAQHYANLMWSGNTDFTHPYNLKQLFEFEV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1281 176 Gene3D SGNH hydrolase 22 90 IPR036514 -
Dere12g1281 176 Gene3D SGNH hydrolase 91 160 IPR036514 -
Dere12g1281 176 Pfam GDSL-like Lipase/Acylhydrolase 37 92 IPR001087 GO:0016788
Dere12g1281 176 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 90 173 IPR044552 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1281 Dere-ChrDere12 23974027 23975807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1281 15 89 Pollen Coat Proteome AT1G75930 43.421 1.97e-11 59.7