Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1271 ATGTGGTATAGATCAGCATCTTTTATTCTCGACAACAGGCAGCCAAACGACGCCGCTTTGAAGCCCGACACGTATTCCATCTCTCCTCCTGGTAGTATTGCCCAGTCTTCCATGGCCGATACCCTTCAGAACCCTAACCCTAACCCTAAGATTTCGGCTTACTATCAGACCAGGGCGGCGCACCACGCCGTCGTCACCAGCGACTGGCTCTCGCAGGCTCAGGCTGCTGTTGCCCAGAATCCTGATGACAATGGAATTCCGGGAAGTGACGTCAGGGTGTTGGACCCTGACAAGCCGTTCAGCGTGATTGATGAATTCAATAACTGGCGGAAACAGCCCGATTTGGCTGAGGCTGTGGCGGCGATTCGCGCCTTGGCGGCGGTGATTAGGTCCAGCAAGGCTACGACTATGATGGAGCTGGAAATTGAGCTCAAGAAGGCTTCGGATTCCCTCAAATCCTGGGATACAACCTCTATCTCTTTGACCGCTGGCTGTGATCTGTTTATGCGATATGTAACTAGGACTTCTGCTTTAGAATATGAAGACTTTAATTCTGCAAAGTCTCGCTTAATTGAACGTGCCGAGAAGTTTGGGGAAATCTCATACAAGGCTCGCAAAATTATTGCAATGCTGGCGCAAGATTTTATATTTGATGGTTGTACAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTTGAAGTTCTTAAACTGGCAGCACAAAATAAAAAACTGTTTCGGGTCTTCTGCACAGAGGGAAGACCAGACCGAACAGGTTTGCGGTTATCTAATGAGCTGGCCAAACTTGATGTTCCCGTTAAACTCCTAATAGACTCTGCGGTGGCATATACTTTGGATGAGGTGGACATGGTATTGGTGGGGGCAGATGGAGTGGTTGAAAGTGGGGGTATAATAAACATGATGGGAACGTACCAAATTGCACTGGTTGCCCACAGTATGAATAAACCAGTTTACGTGGCAGCTGAAAGCTACAAGTTTGCTCGTCTTTATCCTTTGGACCAAAAGGATTTGGCCCCGGCCTTACGCCCTATTGATTTTGGTGTACCCATTCCATCCAAGGTAGAGGTTGAAAGGTCTGCCAGGGACTATACTCCTCCACAATATCTGACTTTGCTTTTCACTGATTTAGGTGTTCTTACTCCATCCGTTGTTAGTGATGAACTCATCCAGCTATACTTGTAG 1200 0.4733 MWYRSASFILDNRQPNDAALKPDTYSISPPGSIAQSSMADTLQNPNPNPKISAYYQTRAAHHAVVTSDWLSQAQAAVAQNPDDNGIPGSDVRVLDPDKPFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRSSKATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKIIAMLAQDFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTLDEVDMVLVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1271 399 FunFam Translation initiation factor eIF-2B subunit alpha 203 399 - -
Dere12g1271 399 FunFam Translation initiation factor eIF-2B subunit alpha 98 200 - -
Dere12g1271 399 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 61 399 - -
Dere12g1271 399 Gene3D - 99 200 IPR042528 -
Dere12g1271 399 SUPERFAMILY NagB/RpiA/CoA transferase-like 115 398 IPR037171 -
Dere12g1271 399 Coils Coil 137 157 - -
Dere12g1271 399 MobiDBLite consensus disorder prediction 28 45 - -
Dere12g1271 399 MobiDBLite consensus disorder prediction 25 45 - -
Dere12g1271 399 Gene3D - 203 399 IPR042529 -
Dere12g1271 399 Pfam Initiation factor 2 subunit family 113 387 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1271 Dere-ChrDere12 23837099 23840596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1271 1 399 Eukaryotic Initiation Factors Gene Family AT1G53880 81.390 0.0 619