Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1229 ATGGAAGGACATAACACTCAGCATGCACAAGTTATTGAAATCCGTAAAGACTCTTCTAACAGCGGGAGGACTCCTGGAGGGAGTAAGATTTGTGGAGAAGCACCATGCGGGTTCTCAGATGCTGGATCAGTCTCTAAGGATTCCCAAGAACGGTCAAATTCGATGCGAAAACTACTGATGGCAGTGGCTCTTTGTGCTATTTTCATGAGCATTGAAGTTGTTGGTGGAATCAAAGCTAACAGTCTTGCAATATTAACTGATGCAGCGCATTTGCTTTCTGATGTTGCAGCCTTTGCCATCTCGTTGTTCTCATTGTGGGCTGCTGGGTGGGAAGCCACCCCTCGTCAGTCATACGGATTTTTCAGGATAGAGATTCTCGGGGCCTTGGTTTCTATCCAATTAATATGGTTGCTTGCAGGGATCCTAGTATATGAAGCCATTCAAAGAATCATTGAGGGTACTCATGAGGTTAATGGCTTATTGATGTTCATAGTTTCTGCATTTGGTCTGCTGGTTAACATCATCATGGCTCTTTTATTGGGTCATGATCATGGACATGGACACGGACACGGACACGGACATGATGAACATGGTCATGGTCATGGTCATAATCATGGCCGTGGCCATAGCCATGGATCTGTAGTGTCTACCCATCACCACCAACATCATCATCATGAAAAGCATCCAAGAGATGAGCATCATCATCATACTCATGATAATGTTAGCGAACCACTTCTCAGTGGATCAAATGGCAGACCAGAGAAGAAGGAATGGAACATCAATGTGCAAGGGGCTTATCTCCATGTACTTGGCGACTCCATCCAGAGTGTTGGGGTAATGATTGGGGGAGCAATCATATGGTACAAGCCTGAGTGGCAAATAGTTGACTTGATTTGCACTCTAATATTTTCGGTAATTGTTTTGGGTACAACTATCAATATGCTGCGAAACATACTGGAAGTTCTGATGGAGAGCACACCTCGTGAGATAGACGCAACTAAACTCGAACAAGGGCTGCTGGACATGGATGAAGTTGTTGCTGTTCATGAGTTGCATATATGGGCCATTACAGTGGGTAAGGTTTTACTGGCTTGTCATGTTAAAATTAGGCCTGAAGCAGATGCAGACATGATGCTGGACAAGGTTGTTGACTATATCAAAAGGGTTTACAACATTAGTCATGTAACCATACAGATAGAGCGCTAG 1206 0.4411 MEGHNTQHAQVIEIRKDSSNSGRTPGGSKICGEAPCGFSDAGSVSKDSQERSNSMRKLLMAVALCAIFMSIEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIQRIIEGTHEVNGLLMFIVSAFGLLVNIIMALLLGHDHGHGHGHGHGHDEHGHGHGHNHGRGHSHGSVVSTHHHQHHHHEKHPRDEHHHHTHDNVSEPLLSGSNGRPEKKEWNINVQGAYLHVLGDSIQSVGVMIGGAIIWYKPEWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATKLEQGLLDMDEVVAVHELHIWAITVGKVLLACHVKIRPEADADMMLDKVVDYIKRVYNISHVTIQIER 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1229 401 MobiDBLite consensus disorder prediction 186 254 - -
Dere12g1229 401 MobiDBLite consensus disorder prediction 203 231 - -
Dere12g1229 401 Gene3D Cation efflux protein transmembrane domain 54 322 IPR027469 -
Dere12g1229 401 MobiDBLite consensus disorder prediction 1 26 - -
Dere12g1229 401 Pfam Cation efflux family 58 323 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Dere12g1229 401 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 6 401 - -
Dere12g1229 401 MobiDBLite consensus disorder prediction 186 202 - -
Dere12g1229 401 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 329 400 IPR036837 -
Dere12g1229 401 NCBIfam cation diffusion facilitator family transporter 55 401 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Dere12g1229 401 MobiDBLite consensus disorder prediction 12 26 - -
Dere12g1229 401 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 324 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1229 Dere-ChrDere12 23244514 23245719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1229 1 401 Inorganic Solute Cotransporters AT2G46800 71.535 0.0 526