Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1205 ATGGGCCAGTGCTACGGCAAGACTAATCCCACCGCGGAAAATGACGATGTCGCACATACAACCACAATTATTGCCGATTCCGGTGGAGCGCCGCAGTCGCCGCTGCCGTCGGGGAGCGGTGGAAACGGCTACCCTTCGGTGAAGAACACGCCTGCTCGGTCGTCCGACTCGAGCCCATGGCCGAGCCCGTACCCGCATGGCGTCAACGCGAGCCCGTTTCCGGGTGGAGTGTCGCCGTCGCCGGCGAGGGCATCGACTCCCAGGAGGTTTTTTCGGCGACCTTTCCCTCCCCCGTCGCCGGCGAAGCATATCAGAGCGTCGCTGGCTAAGCGGCTTGGGCACGGGAAGCCCAAGGAGGGCCCGATCCCGGAGGACCGTGGAACGGAATCGGAGCAGGTGCTGGACAAGAGCTTCGGGTATAGTAAGAATTTTGGTGCGAAGTATGAGTTAGGGAAGGAAGTAGGGAGGGGGCATTTTGGTCATACATGCTCTGCAAGGGGCAAGAAAGGCGAGCTCAAAGATCATCCTTTAGCAGTGAAAATCATCTCGAAGGCCAAGATGACAACAGCGATTGCAATTGAAGATGTTCGTAGAGAGGTGAAGATTTTGAAAGCTCTATCTGGCCATAAGCATCTCATCAAATTTCATGATGCTTGTGAGGATGCCAATAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACAGAATATTGTCAAGGGGAGGAAGGTATACAGAAGAAGATGCAAAAGTTATTGTTTTGCAAATTCTAAGCGTTGTTGCTTTTTGTCATCTTCAAGGTGTTGTACACCGTGACCTAAAACCCGAGAATTTTCTGTTCACTTCAAGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTATCTGACTTCATCAGGCCAGATGAAAGATTGAATGACATTGTTGGAAGTGCATACTACGTTGCACCTGAGGTCCTTCACAGATCATATAGTCTGGAAGCAGATATATGGAGCATAGGTGTTATTACCTATATCATATTATGTGGAAGTCGACCTTTCTGGGCTCGAACGGAATCTGGAATTTTTCGTGCTGTGCTTAGAGCTGATCCTAACTTTGATGATTTGCCTTGGCCTACTGTATCTGCAGAGGCCAAGGACTTTGTAAAAAGGCTATTGAACAAGGACTACAGGAAAAGAATGACTGCTGTTCAAGCCCTGACTCACCCTTGGTTGAGGGATGACAGCCGTCCTATACCTTTGGATATATTAATTTATAAATTGGTGAAGTCTTATCTTCATGCAACACCATTCAAACGAGCAGCACTGAAGGCCCTTTCAAAGGCCTTGTCAGGTGATGAATTGGTGTATCTCAGAGCACAATTCAGATTGTTGGAACCAAACAAAGACGGCTATGTCTCTCTTGACAATTTCAAAATGGCTCTTGTACGTAACTCAACGGATGCCATGAGGGAGTCAAGAGTTCTTGATATCATACATTTGATGGACCCGCTAGCCTATAGGAAGATGGACTTCGGAGAATTTTGTGCAGCTGCAATTAGCACATACCAATTAGAGGCACTTGATAGGTGGGAGCACATTGCCTCCACTGCTTTTGAGCATTTTGAAAGGGAGGGCAACCGTTTGATATCGGTCGAAGAATTGGCTAGAGAGTTGAATCTCGGTCCTTCGGCTTATTCAATTATCAGAGATTGGATAAGAAATACTGATGGAAAGCTTAGTTTACTTGGATACACAAAATTTTTGCATGGTGTGACGCTGCGTAGTTCAAACACAAGACACCATTAG 1803 0.4709 MGQCYGKTNPTAENDDVAHTTTIIADSGGAPQSPLPSGSGGNGYPSVKNTPARSSDSSPWPSPYPHGVNASPFPGGVSPSPARASTPRRFFRRPFPPPSPAKHIRASLAKRLGHGKPKEGPIPEDRGTESEQVLDKSFGYSKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDHPLAVKIISKAKMTTAIAIEDVRREVKILKALSGHKHLIKFHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYIILCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDSRPIPLDILIYKLVKSYLHATPFKRAALKALSKALSGDELVYLRAQFRLLEPNKDGYVSLDNFKMALVRNSTDAMRESRVLDIIHLMDPLAYRKMDFGEFCAAAISTYQLEALDRWEHIASTAFEHFEREGNRLISVEELARELNLGPSAYSIIRDWIRNTDGKLSLLGYTKFLHGVTLRSSNTRHH 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1205 600 ProSiteProfiles Protein kinase domain profile. 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1205 600 PANTHER SERINE/THREONINE-PROTEIN KINASE 132 575 - -
Dere12g1205 600 SUPERFAMILY EF-hand 436 589 IPR011992 -
Dere12g1205 600 MobiDBLite consensus disorder prediction 112 132 - -
Dere12g1205 600 FunFam CDPK-related kinase 1 141 236 - -
Dere12g1205 600 Gene3D - 432 590 - -
Dere12g1205 600 ProSitePatterns Protein kinases ATP-binding region signature. 154 180 IPR017441 GO:0005524
Dere12g1205 600 SMART serkin_6 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1205 600 CDD STKc_CAMK 147 409 - -
Dere12g1205 600 FunFam Calcium-dependent protein kinase SK5 320 417 - -
Dere12g1205 600 FunFam CDPK-related kinase 1 446 518 - -
Dere12g1205 600 MobiDBLite consensus disorder prediction 1 64 - -
Dere12g1205 600 MobiDBLite consensus disorder prediction 1 132 - -
Dere12g1205 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Dere12g1205 600 ProSiteProfiles EF-hand calcium-binding domain profile. 451 486 IPR002048 GO:0005509
Dere12g1205 600 Gene3D Phosphorylase Kinase; domain 1 141 237 - -
Dere12g1205 600 Gene3D Transferase(Phosphotransferase) domain 1 238 431 - -
Dere12g1205 600 Pfam Protein kinase domain 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1205 600 SUPERFAMILY Protein kinase-like (PK-like) 142 431 IPR011009 -
Dere12g1205 600 FunFam CDPK-related kinase 3 140 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1205 Dere-ChrDere12 22889259 22897088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1205 1 594 EF-hand Containing Proteins AT3G50530 57.969 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere12g1205 Pkinase 1.6e-67 CL0016