Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1203 ATGGTGAAAAGTGGGGAGAAGAGTTTGAGGGATCTACCAAAAGGGTACTTGGCAATCAAAGTGGGACAAGAAGGCCAAGTGCAGGAGAGAATTGTGGTGCCTGTGATATACCTGAACCATCCTCTATTTGCTCAGCTTTTGAAGGAGGCTGAGGAAGAGTATGGGTTTGCTCAACAAGGAACCATAATCATCCCTTGCCAATTGGAGCAGTTTAGGTACATTCAAGCCTTGATTCATAGGGAAAAGTCCTCCCACCTCCACCATCTTGCTGCTTGCTTTAGGGTTTGA 288 0.4618 MVKSGEKSLRDLPKGYLAIKVGQEGQVQERIVVPVIYLNHPLFAQLLKEAEEEYGFAQQGTIIIPCQLEQFRYIQALIHREKSSHLHHLAACFRV 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1203 95 Pfam Auxin responsive protein 7 77 IPR003676 GO:0009733
Dere12g1203 95 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 73 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1203 Dere-ChrDere12 22837378 22837665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1203 11 80 Calmodulin-binding Proteins AT3G43120 47.143 3.96e-18 72.4