Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1201 ATGAAGGAACACGTGGCGAAGCGAGAGGGATGGGACGTAGAAATTAGGATACGGCGTGGCTGCATTCGATATGTGGAAAGGAGAGGCGTAGCCATACCGGGGTGGAAGAAAGATGGCAAATCTTCCCCTGTTCTCTGTCCCTCTCCTATAAATACTCCTAAGCCAACGTCCACCATACTCGCCTCACTCCTCCACACCACAACAAGCACTCCTCATTCTTCTCCCTCTCTGGCAATTCATCAAACACTTAACACGCACACCACCATGACCACCCACATTGATCACATCTGGCTCTTCGCCTTAGCTTCCAAATGCACCCAGCACAACATCGCCTTCTCCCTTTTCCTCCTCGCCCTCCTTCTCTGGTTAACCATATCCCTCTTTCACTGGTCTCACCCCGGTGGTCCCGCTTGGGGCAAGTACTATTCCACCAGAAAATCAAAAGCTACTTCTTCTTCCTCTTCCAATTCTCCATTAGCAATTCCTGGGCCAAAAGGGTTACCTCTATTTGGTAGCATGAGTCTTATGATGTCGCTTGCCCACCGCCGTATCGCTGCCGCCGCAGAAGCTTTCGGAGCCAGGAGGCTTATGGCCTTCAGCCTGGGCGAAACGCGGGTGATCGTCACGTGCCACCCGGACGTGGCGAAGGAGATTCTGAACAGTTCGTTGTTTGCGGATCGGCCGGTGAAAGAGTCGGCGTATAGCTTGATGTTTAACAGAGCGATTGGGTTCGCTCCCTACGGGGTTTATTGGCGGACTCTGAGGAAGATCGCCGCCACTCACCTCTTCTGCCCCAAGCAAATCAAAGCCTCGGAGTCGCAGAGGTCGGAGATCGCCGCCCAAATGGTGGAAATGTTCGGAAGCCGTCATGGGAGCTTCAAAGTTCGCGAGGTGCTGAAGAAGGCGTCCCTGAATAGCATGATGAGCTCGGTGTTTGGACAGCGGTATAGGCTGGACGAGTCAAACAGCGAAATGGAGGAGTTGAGAGGGTTAGTGGATCAAGGGTACGACTTATTGGGTACCCTTAATTGGGGCGACCACCTGCCCTGGCTTGCCGATTTCGACGCTCAAAAAATCCGGTTCAGGTGCTCCCAACTCGTCCCTAAGGTGAACCGGTTCGTCAGTAGAATCATCGCCGACCACAGAGCCCAAAAGACCGAAACGAACCGGGATTTTGTGGACGTCTTGCTTTCCCTCCAAGGACCAGATAAATTGACCGACTCCGACATGATCGCTGTACTTTGGGAAATGATATTCAGGGGGACAGATACAGTTGCGGTTTTGATCGAGTGGATATTGGCGAGGATAGTGCTTCATCCTGAAGTGCAATTGAGAGTGCATGCAGAGCTGGACGAGGCGGTTGGGAGATCACGTGCCGTCTCGGAGGCGGACGTGGCGGTGCTGGGATATTTGACGGCGGTGGTGAAGGAGGTGCTGAGGTTGCACCCGCCAGGCCCACTTCTCTCGTGGGCCCGTTTGGCTATCACCGATACGACCATTGATGGGTATTACGTGCCTGCGGGGACCACAGCCATGGTAAATATGTGGGCAATCTCGCGGGACCCACATGTGTGGAGGGACCCATTGGAATTTATGCCTGATAGGTTTGTCACCAAAGGAGGCGAGACGGAGTTCTCCGTTCTGGGGTCGGATCTCAGGCTGGCTCCGTTCGGGTCGGGTCGCAGAACATGCCCCGGCAAGACATTGGGTTTGACCACCGTGAGCTACTGGGTGGCGACGCTTTTGCATGATTTTGAATGGCTACCGTCCGATGAAAGTGAAGTTGATCTCTCTGAGGTGTTGAAGCTTTCTTGCGAAATGGCTAATCCTCTCACTATTAAAGTACGCCCTAGGCGTGGGTTAAACCCATGCTAA 1875 0.536 MKEHVAKREGWDVEIRIRRGCIRYVERRGVAIPGWKKDGKSSPVLCPSPINTPKPTSTILASLLHTTTSTPHSSPSLAIHQTLNTHTTMTTHIDHIWLFALASKCTQHNIAFSLFLLALLLWLTISLFHWSHPGGPAWGKYYSTRKSKATSSSSSNSPLAIPGPKGLPLFGSMSLMMSLAHRRIAAAAEAFGARRLMAFSLGETRVIVTCHPDVAKEILNSSLFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRKIAATHLFCPKQIKASESQRSEIAAQMVEMFGSRHGSFKVREVLKKASLNSMMSSVFGQRYRLDESNSEMEELRGLVDQGYDLLGTLNWGDHLPWLADFDAQKIRFRCSQLVPKVNRFVSRIIADHRAQKTETNRDFVDVLLSLQGPDKLTDSDMIAVLWEMIFRGTDTVAVLIEWILARIVLHPEVQLRVHAELDEAVGRSRAVSEADVAVLGYLTAVVKEVLRLHPPGPLLSWARLAITDTTIDGYYVPAGTTAMVNMWAISRDPHVWRDPLEFMPDRFVTKGGETEFSVLGSDLRLAPFGSGRRTCPGKTLGLTTVSYWVATLLHDFEWLPSDESEVDLSEVLKLSCEMANPLTIKVRPRRGLNPC 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1201 624 Gene3D Cytochrome P450 146 620 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 SUPERFAMILY Cytochrome P450 161 618 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 CDD CYP78 194 611 - -
Dere12g1201 624 PRINTS E-class P450 group I signature 302 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 PRINTS E-class P450 group I signature 514 538 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 PRINTS E-class P450 group I signature 429 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 PRINTS E-class P450 group I signature 554 564 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 PRINTS E-class P450 group I signature 472 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 PRINTS E-class P450 group I signature 409 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 PRINTS E-class P450 group I signature 564 587 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 557 566 IPR017972 GO:0005506|GO:0016705
Dere12g1201 624 Pfam Cytochrome P450 162 598 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 PRINTS P450 superfamily signature 564 575 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 PRINTS P450 superfamily signature 420 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 PRINTS P450 superfamily signature 555 564 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g1201 624 FunFam Cytochrome P450 78A5 153 618 - -
Dere12g1201 624 PANTHER CYTOCHROME P450 78A7-RELATED 89 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1201 Dere-ChrDere12 22766341 22772225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1201 89 619 Cytochrome P450 AT2G46660 69.832 0.0 744