Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1200 ATGATGATGATGAACCTCAAAAGTTCAACTGGGCCTGGCCTATTGGCAAATCGAATTGATCCACTTAGTCGCGGAGATATTGCTATTGGGCTTATTACTAACTTGATCTTTTTTTTCATTTCTATATGTATAAATTCTGAACTCCGACCGATCTGCCAGAGAAAGTCTGAAGAAAGCTTGTTCACCTTTTCTTCCGTCCTCCCACTCCACATCTCCCAATTTCTGAGAGTAGTGGAAGAGGCAACCATGGCTTCAGAAACTTTTACCTTTCAGGTGGTGGCCAAACACAATCATAAAAAAGATTGCTGGATTATAATCGATGGAAAGGTTTATGATGTCACCGCATTTTTGGAAGAACATCCAGGAGGTGATGAAGCTCTGCTGTTGGCTGCTGAGAAGGATGCCACAGATGATTTTGAAGACGTGGGTCACAGTGATTCTGCAAAAGAGATGATGCAAAAGTACCTAATTGGGAAGGTTGATATCAACACCCTTCCAGAAAAGCCTAGCTACCGTCCACCACCACCTACACAAGCATCTGCTGTTCATGACCAATCTTCTGCATTTGTGCTCAAGATCCTGCAGTTTCTGGTTCCATTGCTGATATTGGGCTTTGCATTTTATCTGCAATATTATGGTAAAAAAGCAAGTCCAGCCAAATCTGATAGCTGA 672 0.4226 MMMMNLKSSTGPGLLANRIDPLSRGDIAIGLITNLIFFFISICINSELRPICQRKSEESLFTFSSVLPLHISQFLRVVEEATMASETFTFQVVAKHNHKKDCWIIIDGKVYDVTAFLEEHPGGDEALLLAAEKDATDDFEDVGHSDSAKEMMQKYLIGKVDINTLPEKPSYRPPPPTQASAVHDQSSAFVLKILQFLVPLLILGFAFYLQYYGKKASPAKSDS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1200 223 Gene3D - 79 164 IPR036400 -
Dere12g1200 223 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 86 168 IPR036400 -
Dere12g1200 223 FunFam Cytochrome b5 type B 82 165 - -
Dere12g1200 223 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 85 161 IPR001199 -
Dere12g1200 223 Pfam Cytochrome b5-like Heme/Steroid binding domain 92 160 IPR001199 -
Dere12g1200 223 PRINTS Cytochrome B5 signature 148 160 IPR001199 -
Dere12g1200 223 PRINTS Cytochrome B5 signature 110 120 IPR001199 -
Dere12g1200 223 PRINTS Cytochrome B5 signature 120 134 IPR001199 -
Dere12g1200 223 PRINTS Cytochrome B5 signature 135 142 IPR001199 -
Dere12g1200 223 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 116 123 IPR018506 GO:0020037
Dere12g1200 223 SMART Cyt_b5_2 88 161 IPR001199 -
Dere12g1200 223 PANTHER CYTOCHROME B5 81 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1200 Dere-ChrDere12 22753715 22758104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1200 85 219 NADPH P450 reductases AT5G48810 57.037 5.05e-56 173