Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1194 ATGTCTTCGATAATGGAAATATCTGTTAACAAGCCTGTTTGTCTCATTCTTCTCATAGTATTTGTTTTTCTTGGGTTATTCTTTATTCGGGTGATTCTGTTCAAAACTGGATTCATATATAGTGTGAAGAAACTATGGAGAAGCATTGAAGACTACTTTCATGTTTACCAGTTCTTTAAAGTTCCAGAGCTCGACGGAAGCAGGATGGAGAATCAGCTTTACAAGAAGGTCTCTCTGTATCTGCATTCTCTGCCCTCCATTGAAGACTCTGACTTCACCAACCTCGTAACTTCATCAGGGAAGAAGCAAAACGACATCGTTCTCCGCCTCGACCCCAAACAAATCATCGACGACGAATTTCTCGGAGCCAGAGTGTTCTGGTTTCACGAAGCAGAACACAAATTTGAATCGAAAAACAGAACGTTCGTGCTGAAACTAAGAAAAGTCGACAAGCGAAGAATTCTTGGACCTTATCTCCAGCACATCCACACCGTCGCCGATGAAATAGAGCAACAAGGAAAACGTGAATTGAAGCTATACATAAACGCCGGCGCCGTCACCACTTGCGGAAATGTCCGGTGGAGATCCCTTCCGTTCACGCATCCATCAACCTTCGATACCATGGCCATGGAAACTGATCTGAAGAACAAGATAAAATCGGACCTCGAGTCGTTCCTCAAAGCCAAACAGTACTACCACCGATTGGGTCGGGTATGGAAACGAAGCTTCCTCCTCTACGGACCCTCCGGCACCGGAAAATCGAGCTTCGTCGCTGCCATGGCCAATTTTCTCAGTTACGACGTATTCGACATCGACCTCTCGAACGTTCCAGGAGATTCCGATATGAAGCTGCTTCTGCTCGAAACGACGCCGAAATCGGTTGTCGTAATCGAAGACGTCGATCGGTTCCTGATGGAGAAGAAATCAACGGCTGTTAGCTTATCGGCAGTACTGAACTTCATGGACGGGATTTTAAACTCGTGCTGCGCAGAGGAGAGAGTCATGGTTTTCACGATGACCAGTAAGGATCAAATCGACCCGGATCTGCTTCGTCCGGGTCGGGTCGACGTTCATATACATTTCCCGCTTTGTGACTTCTCGTCGTTCAAGACGCTCGCGAGTAGCTACTTGGGCGTGAAGGACCACAAGCTGTTCCCGCAGGTCCAAGAGATATTTCAAAACGGTGCGAGTTTGAGCCCCGCCGAGATCGGCGAGTTGATGATAGCGAATCGGAACTCACCGAGTCGGGCCATCAAATCGGTGATCAGCGCGCTGCAAACGGACGGCGATGGGAGGGGGAGCGGGAAGATCGGACGGCGGTTGGGGGAGAGCAACGACACCGAGGAATTGGGCGAACGGGGCGGCGGGTCCCCGTATAGCGAGGGTTTCCAAACGGTTAAGGATTTACGGAGACTGTACGGTTTGTTCAGGATGAGGAGCAATGCGAAATCTCAGTCGTCCGATGTCGGTGCAAGTCCGAGGTCAGGTTTCTGA 1494 0.4946 MSSIMEISVNKPVCLILLIVFVFLGLFFIRVILFKTGFIYSVKKLWRSIEDYFHVYQFFKVPELDGSRMENQLYKKVSLYLHSLPSIEDSDFTNLVTSSGKKQNDIVLRLDPKQIIDDEFLGARVFWFHEAEHKFESKNRTFVLKLRKVDKRRILGPYLQHIHTVADEIEQQGKRELKLYINAGAVTTCGNVRWRSLPFTHPSTFDTMAMETDLKNKIKSDLESFLKAKQYYHRLGRVWKRSFLLYGPSGTGKSSFVAAMANFLSYDVFDIDLSNVPGDSDMKLLLLETTPKSVVVIEDVDRFLMEKKSTAVSLSAVLNFMDGILNSCCAEERVMVFTMTSKDQIDPDLLRPGRVDVHIHFPLCDFSSFKTLASSYLGVKDHKLFPQVQEIFQNGASLSPAEIGELMIANRNSPSRAIKSVISALQTDGDGRGSGKIGRRLGESNDTEELGERGGGSPYSEGFQTVKDLRRLYGLFRMRSNAKSQSSDVGASPRSGF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1194 497 Pfam ATPase family associated with various cellular activities (AAA) 244 363 IPR003959 GO:0005524|GO:0016887
Dere12g1194 497 Pfam Domain associated at C-terminal with AAA 43 129 IPR025753 -
Dere12g1194 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 424 IPR027417 -
Dere12g1194 497 MobiDBLite consensus disorder prediction 427 462 - -
Dere12g1194 497 PANTHER BCS1 AAA-TYPE ATPASE 52 426 - -
Dere12g1194 497 Gene3D - 195 376 IPR027417 -
Dere12g1194 497 SMART AAA_5 239 365 IPR003593 GO:0016887
Dere12g1194 497 MobiDBLite consensus disorder prediction 433 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1194 Dere-ChrDere12 22656685 22658178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1194 235 361 Calmodulin-binding Proteins AT3G56690 31.690 2.24e-08 55.1