Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1129 ATGGAAGGGGAACTACTTAGCCTGATCAATGAGCTAACCCAAGGAAAGGAGCTGGCAAGGGAGCTCTGTAACCATATTCTCTCATCTTCTTCGTCTCATGAAACTAATGAGTTCTTGATTGAGAAAATACTGTGTTCCTATGAGAAAGCACTGAAGATGCTTAAATGGGGAGAAAATGTGGGAGAGGCTAATGCCGCCATTGCCCAAGGGAGCCCCAGGTCTGATGTCTTGGACGAGGAAGACAAGCACAGAGATGTCTTCAAGAAAAGGAAGATGATGCCTAGATGGACAGAGAAAGTCAAGGTTTGCTCAGGAACAGGGCTTGAGGGTGCCTTGGATGATGGTTATAGTTGGAGAAAATATGGCCAGAAGGATATTCTTGGATCTAAATTTCCAAGAGGATACTACAGATGTACACATAGAAATGTACAAGGTTGCCTTGCAACAAAACAAGTTCAAAGGTCTGATGAGGACCCAACAATATATGAAGTGACCTACAGAGGAAGACATACCTGCAACAACCAAGCATCCTACTTAAACAAGGTGTCATCATCAAAGACAAAGATAGGTTTGGGAGAAAATCATCGTCGTCGTCATCATCAATACCATGAAAGCAATTACCTGCCAAACGAACACGAAGAAGAGAACATGGAACAACCCCTGGAGACATTCTTCACCTTTGAACCAGAACATGAAGTCAAAATGGATGACATTTTCCCTTCGTTTGGCTTTCCATCCTCATCTGAAAACCATTTCGTGGATAACTTTTCAGCTGATTTCATTTCCCCATCGACCTCAGAATCAAATCTTTTATGCGTGTCACCATATCACTTAGGAAGTGCTATAATAGGGCAAAACGTGCAGAGTTCAGAATCTGAAGTGACTGAGATAGTTTCAGCCCCAAATTCAGTCACCAATTCCCCTTTAGTTGATTTGGATCTCTTGCTTGATAAGGGGGATTTTCAGTCCAACTTCCATTTCAACACTTTTGAATTTTTCTCTTCTTAA 1008 0.4196 MEGELLSLINELTQGKELARELCNHILSSSSSHETNEFLIEKILCSYEKALKMLKWGENVGEANAAIAQGSPRSDVLDEEDKHRDVFKKRKMMPRWTEKVKVCSGTGLEGALDDGYSWRKYGQKDILGSKFPRGYYRCTHRNVQGCLATKQVQRSDEDPTIYEVTYRGRHTCNNQASYLNKVSSSKTKIGLGENHRRRHHQYHESNYLPNEHEEENMEQPLETFFTFEPEHEVKMDDIFPSFGFPSSSENHFVDNFSADFISPSTSESNLLCVSPYHLGSAIIGQNVQSSESEVTEIVSAPNSVTNSPLVDLDLLLDKGDFQSNFHFNTFEFFSS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1129 335 SUPERFAMILY WRKY DNA-binding domain 111 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g1129 335 FunFam WRKY transcription factor 53 98 175 - -
Dere12g1129 335 ProSiteProfiles WRKY domain profile. 107 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g1129 335 SMART WRKY_cls 112 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g1129 335 Gene3D WRKY domain 99 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g1129 335 Pfam WRKY DNA -binding domain 113 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g1129 335 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 249 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1129 Dere-ChrDere12 21795973 21797642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1129 1 319 WRKY Transcription Factor Family AT2G46400 39.640 4.55e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere12g1129 WRKY 1.5e-27 CL0274