Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1096 ATGGGAAACAGTGAGGAAGGGAAGGCTACTAAAGGTGAAAAACCCTCTTCACCTGTGACAACGGATCAGGCCAACCAGGTCAACCAGACCAATGTTCATCTCTATTCTGATTGGGCTGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCATACTACACCTCAGCCGTGGCTCCTGGTCACGCACCTCACCCTTTCATGTGGCCGCCACAGCCTATGATGCCACCCTATGGGGCGCCTTATGCAGCAATTTATTCACATGGAGGTGTTTATCCTCACCCTGCATTGCCTATTGGGCCACAATCACATGGTCAAGGAATTCCGTCTTCCCCTGCTGCTGGAAATCCTTTAAGCATGGAGACACCAACTAAATCGTCCGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGGGTTTGATGGACTTGCAATGTCAATAGGCAATGGCAATGCTGAGAGTGCTGAGCGTGGAGTTGAAAATAGGCTGTCACAGAGTGAGGACACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGAGAGGGAACACCAACCACTGTTGGAGATGGGAAAACTGAGTTACAGGCTGCTGCTGCTCCCAAACAGACTGTAGCTTCCAACAGGATATTGCCAGTTACCCCTGCTAGCGTTGCAGGAAAAATAGCTGGAGCTGTAGTTTCTTCAGGCATGACCACTGCACTGGAGCCAAGGAACCCTCAGACTGTTCATTCTAAACCAAATCCCACAAATGTTGGACAACCTTGTGCTGTGGTGCCTCCTGAAGCTTGGTTACAGAATGAACGGGAGCGGAAACGAGAGAGGAGGAAACAGTCAAATCGAGAATCTGCTAGAAGGTCAAGGCTAAGAAAGCAGGCTGAGACGGAAGAGCTTGCACGAAAAGTTGAATCCTTGAATGCTGAGAATGTGACTCTAAAATCAGAAATAAAGCGATTGACTGAAAATTCTGAGAAACTGAGGGTGGAAAATGCTACTTTAATGGAAAAACTGAAAAATGCACAACAGACGGAACAAATAGTTTTGAACAGCATTGATAGCAAGAGGGCTACACCGATAAGCACAGAAAACTTACTTTCTAGAGTTAATAATTCTAGTTCCAATGATAGAACTACGGAGGATGACAATGATTTTTGTGACAACAAACAAAACTCTGGTGCGAAGCTGCATCAACTACTCGATACGAGTCCTAGAGCTGATGCTGTAGCAGCTGGCTAA 1275 0.4651 MGNSEEGKATKGEKPSSPVTTDQANQVNQTNVHLYSDWAAMQAYYGPRVTMPPYYTSAVAPGHAPHPFMWPPQPMMPPYGAPYAAIYSHGGVYPHPALPIGPQSHGQGIPSSPAAGNPLSMETPTKSSGNTDQGLMKKLKGFDGLAMSIGNGNAESAERGVENRLSQSEDTEGSSDGSDGNTAGANQTRRKRSREGTPTTVGDGKTELQAAAAPKQTVASNRILPVTPASVAGKIAGAVVSSGMTTALEPRNPQTVHSKPNPTNVGQPCAVVPPEAWLQNERERKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENVTLKSEIKRLTENSEKLRVENATLMEKLKNAQQTEQIVLNSIDSKRATPISTENLLSRVNNSSSNDRTTEDDNDFCDNKQNSGAKLHQLLDTSPRADAVAAG 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1096 424 MobiDBLite consensus disorder prediction 246 309 - -
Dere12g1096 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Dere12g1096 424 MobiDBLite consensus disorder prediction 278 309 - -
Dere12g1096 424 MobiDBLite consensus disorder prediction 150 223 - -
Dere12g1096 424 MobiDBLite consensus disorder prediction 246 265 - -
Dere12g1096 424 CDD bZIP_plant_GBF1 291 334 IPR045314 GO:0003700|GO:0006355
Dere12g1096 424 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Dere12g1096 424 MobiDBLite consensus disorder prediction 167 187 - -
Dere12g1096 424 MobiDBLite consensus disorder prediction 14 28 - -
Dere12g1096 424 Gene3D - 283 337 - -
Dere12g1096 424 Pfam Disordered region downstream of MFMR 132 262 - -
Dere12g1096 424 Coils Coil 301 356 - -
Dere12g1096 424 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 395 IPR044827 GO:0003700|GO:0006355|GO:0043565
Dere12g1096 424 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Dere12g1096 424 MobiDBLite consensus disorder prediction 101 136 - -
Dere12g1096 424 MobiDBLite consensus disorder prediction 375 424 - -
Dere12g1096 424 MobiDBLite consensus disorder prediction 105 134 - -
Dere12g1096 424 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Dere12g1096 424 MobiDBLite consensus disorder prediction 1 28 - -
Dere12g1096 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Dere12g1096 424 SUPERFAMILY Leucine zipper domain 285 339 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1096 Dere-ChrDere12 21171087 21174940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1096 1 424 bZIP Transcription Factor Family AT2G46270 51.508 2.49e-123 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere12g1096 MFMR_assoc 3.7e-24 No_clan