Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere12g1004 | ATGGGCTTCCCAGTCGGATACTCCGAGGTCGTCTTCCCTAACATCTTCCTCCACACGCTCTCCGTCCTCGGATTCATCCGAAACCTCATTTTCCTGCTCTTCCACTCCCTCGGCCTCTCTGATTTCCTCGAAACCGAGGTCGTCTGGTCCGAATCTCACGCCCGATTGCCCGACAGCCCGCCGGTGTCGGCGCTCCTGATCCGCGAATTCCTCCCCGTCGTGAAATTCGGCGACCTCGCCGGAGACGCGCCGGAGAGTTGCGCCGTGTGCCTGTACGAGTTCCAGGGGGAGGACGAAATCAGGTGCTTGGCGAACTGCAAGCACATTTTCCACCGGGCGTGTCTCGACCGCTGGATGGATCACGATCAGAAGACGTGTCCCTTGTGTAGGACCCCCTTCGTGCCTGATGATATGCAGGATGATTTCAATCAACGGCTCTGGGCTGCTTCTGGAGTTTCTGATTTTTACGAAGAGTACACTTCGCTCTGA | 489 | 0.5746 | MGFPVGYSEVVFPNIFLHTLSVLGFIRNLIFLLFHSLGLSDFLETEVVWSESHARLPDSPPVSALLIREFLPVVKFGDLAGDAPESCAVCLYEFQGEDEIRCLANCKHIFHRACLDRWMDHDQKTCPLCRTPFVPDDMQDDFNQRLWAASGVSDFYEEYTSL | 162 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere12g1004 | 162 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 138 | IPR013083 | - | |
Dere12g1004 | 162 | SUPERFAMILY | RING/U-box | 86 | 136 | - | - | |
Dere12g1004 | 162 | SMART | ring_2 | 87 | 129 | IPR001841 | - | |
Dere12g1004 | 162 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 24 | 150 | - | - | |
Dere12g1004 | 162 | FunFam | RING-H2 finger protein ATL73 | 67 | 137 | - | - | |
Dere12g1004 | 162 | Pfam | Ring finger domain | 86 | 130 | IPR001841 | - | |
Dere12g1004 | 162 | ProSiteProfiles | Zinc finger RING-type profile. | 87 | 130 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere12g1004 | Dere-ChrDere12 | 19470566 | 19471054 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere12g1004 | 1 | 161 | C3H Transcription Factor Family | AT1G63840 | 52.941 | 1.42e-56 | 173 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere12g1004 | 12 | 19470566 | 19471054 | Dere12g1004 | 12 | 19470566 | 19471054 | ECH |