Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0993 ATGCTTGGTAATGGGAAACAAGTGGATTTGTATAAGCTCTTCATGGTTGTTAAGGAGAACGGTGGGTATGATGCAGTCTCCAAAAACCGTTTATGGGATCTGGTGGGTGAACAATCTGGATTGGGTATGAGCATTGGTTCATCTGTGCAACTGATTTACACTAAGTACTTGAGTACTTTAGAGATATGGCTGAAGCGAGTTGCTGACAGTAAGGTCTCTGACTGTAGTCTGGAGTTTAACAGAGTTGATTTTGGTAGGCACTTGATGGAGTTGCATGCAGAAGTTGAAGGGTCCTTGTCGGATTGTACTGATGAAGAGGTGGGACATGAGATGTGTCAACGTTCTAAGTTGAAAACTGAAAAAGAACACCAAGGTGGTGGCGTATTGTGTGGTGCTAAGGGAGTAAAGAGCGGGGCTGCAGGGTCCGGGGGGGCCAAAAGAGATAAAAATGGAGGATTTGTTGGTTTGAATAAGTCAGACCCTGAGATGAATAAACCGAGTCCAGGAAATTTGAGCATTAAGAATGAGATCAACAAAATGCCCGGATTGTTAGGTGGAGGCAAGAAATGTAACAATGATGATGATGATGTTTTGGTATTGGATCCATCTGATGTTAATAAAGGGAGCTTTGATCGTAAGAGGAAAAGAGAGTCTATGTGGGGAATGCTAAGATGGGTGACTGGCATTGCAAAGAATCCTTGTGATCCTATTGTAGGTTCAATACCTGAAAAATCAAAATGGAGGTCCCACGGTAAAGAGGAGATCTGGAAGCAGGTTTTGTTGTTTCGGGAAGCTGTTTTTCTGAAAAGACATGTTGAGTCAAGTGGCGAACAACTGAATTGGCAGTGTGATGGGTTTGTAGTTGTGCTTGTAATTCTGGATTTCCATCCCCTTTTGGTCCCCAAGCTTAAGCTTTTGTTGGCAGCTTTTACTGCTTGA 939 0.4302 MLGNGKQVDLYKLFMVVKENGGYDAVSKNRLWDLVGEQSGLGMSIGSSVQLIYTKYLSTLEIWLKRVADSKVSDCSLEFNRVDFGRHLMELHAEVEGSLSDCTDEEVGHEMCQRSKLKTEKEHQGGGVLCGAKGVKSGAAGSGGAKRDKNGGFVGLNKSDPEMNKPSPGNLSIKNEINKMPGLLGGGKKCNNDDDDVLVLDPSDVNKGSFDRKRKRESMWGMLRWVTGIAKNPCDPIVGSIPEKSKWRSHGKEEIWKQVLLFREAVFLKRHVESSGEQLNWQCDGFVVVLVILDFHPLLVPKLKLLLAAFTA 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0993 312 MobiDBLite consensus disorder prediction 140 172 - -
Dere12g0993 312 CDD ARID 4 61 - -
Dere12g0993 312 Gene3D - 1 75 IPR036431 GO:0003677
Dere12g0993 312 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Dere12g0993 312 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 278 - -
Dere12g0993 312 Pfam ARID/BRIGHT DNA binding domain 4 61 IPR001606 GO:0003677
Dere12g0993 312 SUPERFAMILY ARID-like 4 75 IPR036431 GO:0003677
Dere12g0993 312 SMART bright_3 2 66 IPR001606 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Dere12g0993 ARID 8.2e-10 CL0123