Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0982 ATGGAGGGAAAAGACGAGGACGTGAAGGTGGGAGCCAACAGGTTCACGGAGAGGCAACCCATCGGCACCTCGGCTCAGACCAAGGACTACAAGGAGCCACCGGCAGCACCTCTGTTCGAGCCGGAGGAGCTTCACTCATGGTCCTTCTGGAGAGCCGGGATTGCCGAGTTCATAGCCACATTCTTGTTTCTCTACATCACACTTCTCACTGTCATGGGTTTTTCCAGAACTCCCAACAAGTGCGCTTCTGTGGGTACTCAGGGCATCGCTTGGGCCTTTGGGGGTATGATCTTCGCCCTCGTTTACTGCACCGCCGGAATCTCAGGTGGACACATCAACCCAGCAGTGACATTTGGTCTTTTTCTGGCAAGGAAGCTCTCACTAACCAGGGCAGTATTCTACATAGTGATGCAGTGCCTTGGTGCTATATGTGGTGCTGGTGTTGTGAAAGGGTTCCAGCCCCACCTGTATGAGAGATTTGGTGGTGGGGCTAATGTCGTAAATCATGGCTACACTAAGGGAGATGGCCTTGGTGCTGAGATTGTTGGCACCTTTGTTCTTGTCTACACTGTATTTTCTGCAACAGATGCCAAGAGGAATGCCAGAGACTCTCATGTCCCTATCTTGGCTCCACTTCCAATTGGGTTTGCTGTGTTTTTGGTGCACTTGGCTACCATCCCCATCACAGGAACTGGTATCAACCCAGCCAGGAGCCTTGGAGCTGCCATTATTTACGACAAGGGTCATGCTTGGGATCACCATTGGATCTTCTGGGTGGGACCATTCATTGGAGCTGCACTTGCTGCCCTCTACCACCAGATAGTTATCAGAGCCATTCCATTCAAGAGCAGAGTTTGA 858 0.5163 MEGKDEDVKVGANRFTERQPIGTSAQTKDYKEPPAAPLFEPEELHSWSFWRAGIAEFIATFLFLYITLLTVMGFSRTPNKCASVGTQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPHLYERFGGGANVVNHGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDKGHAWDHHWIFWVGPFIGAALAALYHQIVIRAIPFKSRV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0982 285 CDD MIP 51 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0982 285 SUPERFAMILY Aquaporin-like 42 277 IPR023271 -
Dere12g0982 285 FunFam Probable aquaporin PIP1-2 36 285 - -
Dere12g0982 285 NCBIfam MIP family channel protein 55 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0982 285 ProSitePatterns MIP family signature. 111 119 IPR022357 -
Dere12g0982 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 280 IPR034294 -
Dere12g0982 285 Pfam Major intrinsic protein 43 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0982 285 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0982 285 PRINTS Major intrinsic protein family signature 255 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0982 285 PRINTS Major intrinsic protein family signature 130 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0982 285 PRINTS Major intrinsic protein family signature 179 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0982 285 PRINTS Major intrinsic protein family signature 93 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0982 285 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0982 285 Gene3D Glycerol uptake facilitator protein. 36 283 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0982 Dere-ChrDere12 18964122 18967677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0982 1 284 Major Intrinsic Protein MIP AT3G61430 88.070 2.14e-179 494