Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0957 ATGGCTGGTGGAAGTCCCAATCCTGAGAAAATGTGGAGTAATCTAAGGACAAAGCTAGCTGTTGCAGTAAAGAGTATTCAATGGAGCTATGGGATTTTCTGGGCATCTTCCACCACCAAACAAGGAGCATTGGAATGGAATGAAGCGTACTACAATGGTGAAATCAAGACAAGGAAGACAGTCCAAGCCATGATGGAACTAAAGGCCGACAAAATTGGGTTTCAGAGGAGTGAGCAACTGAGAGAACTCTATGAGTTTCTTCTTGTCGGTGAAGCGGATCCACAAGCTAAAAGGCCTTCTGCTGCATTGTCTCCAGAGGATCTCACAGACTTGGAGTGGTACTACTTGGTTTGCATGTCCTTTGTGTTCAATCATAACCAAAGTTTGCCTGGAAGAGCACTAGAGAAGTGCGAAACCATCTGGTTATGCAATGCTCATTATGCAGATAGCAAAGTTTTCTCTCGTTCTTTGCTAGCCAAGAGTGCATCAGTTCAGACTGTGGTGTGTTTTCCCTACCTGGGAGGTGTTATCGAGATAGGCACAACTGAGCTGGTCTCAGAGGACCATAATCTCATCCAACATGTCAAAGCTTGCTTCTTAGAATTCTCAAAGCCTATCTGCTCTGATAAACCATTATCTTCCCTCAATAAGGCAGATGAAGATAAAGATCCAATATGCACTAAGGTTGATGCTTGGACATTGGATAATACAATGACGTTAAAAAACCTATGTTGTACTGAAAAATTCAAAGTTGATCAAGATCCAGCTGATGAACTTCGAGATAACAATGAGGGGATTGACATGGATTCTCCTGATGAATGTTCTCATGGTTGCAATATGGAGGACTCCATGATTGAGTGCATCAGTGGTGCTCTAGATTCTTTGAGTTCCGGTGATTGTATATCTGAAACTTTTGAGAACCAAGGCAAGGCATTTAAGAATGAGGATCAAATTCAGTTAAGGGAACCTCATGGCTGTAATCACTCAAAACTACGCTTCTTGGATATTGGAGCCAATGAAGACTTGTACTATGCAAGAACTATCCATGCTCTCCTCGCAAACTCTTCCATGTTTAAAGGATATCCGTTTGCTAGCAACTCGAATTGCAGATCGAGTTTTGTACAATGGAAGAATGGGGGAGCTCCTGAAAGGGCAAGGCAACAGTTAGACCAATCCATGTTGAAGAAGATTTTGTTCACTGTCCCTCTGATGCATGGCAGTTGCTTGTGTCTCAAGTCACAAACACAGCATGATAAGATAGAATTTCCCAGAAAATTGGACAATGATGATTACTGCATGAGAAATGCATTATCTGATAAAAGAGAAACGGACAACTTTCAAGTCCTCAATTCCATGGTTCCTTCTATAAACGAGGTGGACAAGATTTCAATCCTCAACGAGACAATCAACTACATGAAAGAGCTTGAAGCAAGAGTGGAAGAACTAGAATCTTGCATGGACATTGCAGACTCTGAAACCAGAATGAGAAGCCTAGATGTTCTGGAGCAGACATCGGATAACTACGAAACCAGAAAGATTTACAAAGGAACGAAACCTTGTGTAAACAAGAGGAAGGCTTGTGATGTTGATGAATCTGAGACAGAGTTAAACAGAATAGTCATTAGAGAAGGCAGACCATGGGATGTAAAAGTGAACATGAAGGAGCAGGAGGTTATGATTGAGATGAAATGTCCTTATAGGGAATACATATTGCTTGACATCATGGATGCCATAAATTATGTGCATTTAGAAGCTCACACAGTTCAATCATCAACAGTTGATGGAGTTCTCATATTGACACTTAAATCTAAGTTTCGAGGAGAGGCAATTGCACCAACGAGGATGATCTATGAAGCACTCTGGAAAGTTTCTGGCAAGACTTGA 1884 0.414 MAGGSPNPEKMWSNLRTKLAVAVKSIQWSYGIFWASSTTKQGALEWNEAYYNGEIKTRKTVQAMMELKADKIGFQRSEQLRELYEFLLVGEADPQAKRPSAALSPEDLTDLEWYYLVCMSFVFNHNQSLPGRALEKCETIWLCNAHYADSKVFSRSLLAKSASVQTVVCFPYLGGVIEIGTTELVSEDHNLIQHVKACFLEFSKPICSDKPLSSLNKADEDKDPICTKVDAWTLDNTMTLKNLCCTEKFKVDQDPADELRDNNEGIDMDSPDECSHGCNMEDSMIECISGALDSLSSGDCISETFENQGKAFKNEDQIQLREPHGCNHSKLRFLDIGANEDLYYARTIHALLANSSMFKGYPFASNSNCRSSFVQWKNGGAPERARQQLDQSMLKKILFTVPLMHGSCLCLKSQTQHDKIEFPRKLDNDDYCMRNALSDKRETDNFQVLNSMVPSINEVDKISILNETINYMKELEARVEELESCMDIADSETRMRSLDVLEQTSDNYETRKIYKGTKPCVNKRKACDVDESETELNRIVIREGRPWDVKVNMKEQEVMIEMKCPYREYILLDIMDAINYVHLEAHTVQSSTVDGVLILTLKSKFRGEAIAPTRMIYEALWKVSGKT 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0957 627 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 15 199 IPR025610 -
Dere12g0957 627 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 444 488 IPR036638 GO:0046983
Dere12g0957 627 Gene3D - 440 508 IPR036638 GO:0046983
Dere12g0957 627 SMART finulus 436 481 IPR011598 GO:0046983
Dere12g0957 627 Coils Coil 465 492 - -
Dere12g0957 627 PANTHER TRANSCRIPTION FACTOR TT8 8 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0957 Dere-ChrDere12 18574247 18579385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0957 14 624 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 40.729 2.71e-135 407