Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0922 ATGGCTACTTCTGCCACCACCAACACCAACGCCGTAGTCGTGGTCCTCCTCCTTCTGGCCACCACCGTGTTCGGCTATCGGGAAACACAGCTGCTTCAGATCGCCGAAGCCCAGGTTCATCAGGTCAAGACTCGGGTACAGAGTGGCCTTACGGGCTTGATCCTTTCATCGTCATTATCGTCTCAGAGAGTTTCTGTGGGTGTGGCGATTGAAGACTGTGCTAAGCTGTATGAAGAGAGCGAGGCTAGGCTCTCTGAAATGGTGTCTGTGAAGAAGAAGAGGATGGGATATTATAGCAGAGAAGATGGCCTGACGTGGGTGAGTGCTGTAATGGCAAACCATAGGACCTGTTTGGATGGGTTGGAGGAAGTGGGTTATGCAGAAGCTCAGGGTTTGGGGAAGAACTTGACTTCGTTGCTTGGAGAAGCTCTTGGTTTGTATGCGAAGAAGAAGGGCAAAGGAAAAGAGCCACCACCCCCAAGGAGAAACGTACCCAACTCATACAGGGGACTCCTGGCGTCATGGAGCCCGGCGACGTCCAGGGCGAACTTCACGGTGGCTCACGACGGCTCCGGAAGCCACAGGACAATCAGGGAGGCGGTTGAAGCAGTGGGGTCGATGGGGGAGAGGCGTGAAGAAAGAGTGGTGATCCACGTGAAAGCAGGAGTGTACAATGAGAAGGTTGAGATCGGATACAAGCTCAGAAACGTGATGCTCGTTGGAGATGGAATTGACAGAACTGTAATCACCGGCAGCAGAAGCGTCGTCCAGGGTTCTACCACCGTCGGCTCCGCCACTGTTGATATATCAGGGGACGGCTTCTGGGCGAGAGACCTAACGTTCGAGAACACGGCAGGCCCAGAGAAACACCAAGCAGTAGCCACCAAGGTGAGCTCAGACATGTCCGTCTTCTACAGATGTAGCTTCAGAGGCTACCAAGACACCCTCTACGTCCACTCCAACCGCCAGTTCTACAGAGACTCCGTCATCTCCGGCACTGTCGACTTCATCTTCGGCGACGCCGCCGTCGTCTTCCAGAACTGCGACATCCTCCTCCGGGAGCCCATGTCGCACCAGTCCAACTTCATCACCGCGCAAGGCCGAGACGACCCCAACGAGCCCACCGCCATCTCCATCCACAACTGCAGAATCCGGGGAGACTCTGGTGTAGGCGAAGTTAAGAGCTATCTGGGACGGCCATGGAAGAAGTATTCGAGGACTGTGTTCCTGAAGAGTGATCTAGACGGGCTGATCGACGCTAAAGGGTGGAGCGAGTGGAGTGGGAGCTTTGCACTTTCGACTCTCTACTATGGGGAGTACATGAACACTGGACCTGGAGCTTCGACTCAGAATAGGGTGAAGTGGCCTGGTTTTCATGTGATGAGTTCTCCAAATGAGGTTAGGCCCTTCTCTGTGAATCAGCTTTTGCTCGGTGATCGCTGGATTCCGGCCACCGGAGTGCCCTTCTCGGCCGGACTTTGA 1482 0.5479 MATSATTNTNAVVVVLLLLATTVFGYRETQLLQIAEAQVHQVKTRVQSGLTGLILSSSLSSQRVSVGVAIEDCAKLYEESEARLSEMVSVKKKRMGYYSREDGLTWVSAVMANHRTCLDGLEEVGYAEAQGLGKNLTSLLGEALGLYAKKKGKGKEPPPPRRNVPNSYRGLLASWSPATSRANFTVAHDGSGSHRTIREAVEAVGSMGERREERVVIHVKAGVYNEKVEIGYKLRNVMLVGDGIDRTVITGSRSVVQGSTTVGSATVDISGDGFWARDLTFENTAGPEKHQAVATKVSSDMSVFYRCSFRGYQDTLYVHSNRQFYRDSVISGTVDFIFGDAAVVFQNCDILLREPMSHQSNFITAQGRDDPNEPTAISIHNCRIRGDSGVGEVKSYLGRPWKKYSRTVFLKSDLDGLIDAKGWSEWSGSFALSTLYYGEYMNTGPGASTQNRVKWPGFHVMSSPNEVRPFSVNQLLLGDRWIPATGVPFSAGL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0922 493 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 148 IPR035513 -
Dere12g0922 493 Gene3D - 177 493 IPR012334 -
Dere12g0922 493 Pfam Plant invertase/pectin methylesterase inhibitor 33 129 IPR006501 GO:0004857
Dere12g0922 493 SUPERFAMILY Pectin lyase-like 178 492 IPR011050 -
Dere12g0922 493 CDD PMEI-like_4 29 148 - -
Dere12g0922 493 ProSitePatterns Pectinesterase signature 2. 330 339 IPR033131 -
Dere12g0922 493 Pfam Pectinesterase 184 478 IPR000070 GO:0030599|GO:0042545
Dere12g0922 493 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 128 IPR035513 -
Dere12g0922 493 PANTHER PECTINESTERASE 38 483 - -
Dere12g0922 493 FunFam Pectinesterase 177 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0922 Dere-ChrDere12 17522848 17528017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0922 12 493 Carbohydrate Esterase AT3G60730 52.224 0.0 536