Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0915 ATGGACGTTTTTGAAGACAAGAGGGGTCTGGTGAAGGAAGAGGATTCGAATATCAAACTTGGTCTCGGAGTTGGAGCTTACTCTGCAGAAGCAATAAACTCTGTGGTCCAACGCGAGAAGAACCCTTTTTTAACAGAGGCACAGAGGCGTGAGCTCGTCCATCAAGCTTTCATCTTCAAGCATTTTGCACATAACTGTCCTGTTCCTAACCACCTTTTGCTTCCCATTTTGAAAAGTGTGGCTGCCGCTTCCAAGTCTGGCTTTGCGGGTATCTGCAAGCAATTTCCAAGCTGCGTGTCGACTTTGCTTCGTAAAGGGTTCAGTCACAAGGGTTTTGATTATGGAAATATGGTGGATCATGGACCCCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGCAGAGGCAAGGTATTGGCCAATCAGAAGTACTGTGAGCGACACATTCACAGAGGTCGTGACCGTTCAAGAAAGCATGTGGAAGCATCTGAAGTTAACTCTTCTTCCTTAACAAAGCCATCTGACAAGTTACAGGCCTATCGAAGCTCAAACACTGAAGCCGCAGCTCCAGTTCTGGTGTCGGTTTCAAACCCTTTAAGCATTCAACTCATTAACACATCTGTCTTTACTCCTAGCAGCCCCTTTACTCTTGAGACCTCGGTTGCTAAAGAATGCAAGAATAGCTTAGGGTCTGCTGGCACCCAAACTTCCTTTCCTCCAGCTTTTGCAACATCCCCAAGCTCTACTGTCGTTACTGTTGCTGTCCCTTCAGACACCACTATCAGCAGCACAACAGCCATTGCTTCTAACAACAAAAGTAACCTTAATTTCTTCAAGAAAGATTACATTGCTGAGAGCTATATGAGGCACAACAACGTTGGAGTTGGAAGCAGTCAAATAGGAACCATAGTTAATAACAGTAATATCTCTATTGGAATAGGTTTCTCCCCAAGGAGTGTTCTTCAAGGTTGCCATCATTCACTCCTCATTGACAGGAACAATACAGAACTTGAACCAGGCAGGTGTCGGAGAACAGATGGTAAGAAGTGGCGGTGCCGGAGGGCTGCTCTTCCTGATCAGAAGTATTGTGCAACACATGTGCACCGAGGTGCTAAGAAGCGTTTTGCAGAGCATAGATCCTCTGTTCCTCTCAGTTCTGCCATAACTATCGCCCAATTGCCTTCCGCTGCAGTCACATCCAACATTCAGAAAGCATACTGTACAATTCCAAATACAAATCTTTCCATGTCAATCCCACCAAGTGCACCATCGGTACAATGTAAAGAGAAAAGCCGGAGCAGCAGTGACACTGATACTACCATCAGTGACACCTTGAACAAATATAGCTATACTTTTTCGGAAGTTGTTTCAAAGTTTGAACCTGTCTAA 1392 0.4497 MDVFEDKRGLVKEEDSNIKLGLGVGAYSAEAINSVVQREKNPFLTEAQRRELVHQAFIFKHFAHNCPVPNHLLLPILKSVAAASKSGFAGICKQFPSCVSTLLRKGFSHKGFDYGNMVDHGPHRCRRTDGKKWRCRGKVLANQKYCERHIHRGRDRSRKHVEASEVNSSSLTKPSDKLQAYRSSNTEAAAPVLVSVSNPLSIQLINTSVFTPSSPFTLETSVAKECKNSLGSAGTQTSFPPAFATSPSSTVVTVAVPSDTTISSTTAIASNNKSNLNFFKKDYIAESYMRHNNVGVGSSQIGTIVNNSNISIGIGFSPRSVLQGCHHSLLIDRNNTELEPGRCRRTDGKKWRCRRAALPDQKYCATHVHRGAKKRFAEHRSSVPLSSAITIAQLPSAAVTSNIQKAYCTIPNTNLSMSIPPSAPSVQCKEKSRSSSDTDTTISDTLNKYSYTFSEVVSKFEPV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0915 463 ProSiteProfiles WRC domain profile. 337 382 IPR014977 -
Dere12g0915 463 SMART QLQ_2 42 78 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere12g0915 463 MobiDBLite consensus disorder prediction 152 177 - -
Dere12g0915 463 Pfam QLQ 44 76 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere12g0915 463 Pfam WRC 339 375 IPR014977 -
Dere12g0915 463 Pfam WRC 122 162 IPR014977 -
Dere12g0915 463 PANTHER GROWTH-REGULATING FACTOR 5 318 437 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dere12g0915 463 ProSiteProfiles QLQ domain profile. 43 78 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere12g0915 463 MobiDBLite consensus disorder prediction 419 441 - -
Dere12g0915 463 ProSiteProfiles WRC domain profile. 119 163 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0915 Dere-ChrDere12 17333709 17336499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0915 38 375 GRF Transcription Factor Family AT2G45480 34.571 1.20e-39 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dere12g0915 WRC 2.3e-17 No_clan