Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0907 ATGGACATCCTCTTGTGGCTTTTGACCTTAACGTCCTTCTCCATTCTCGCTCTCTTCTTATCCCTAGCCTTCTCCCTCTTCGCCGGCAACTCCATCGGAGACCCGAGGTATGCGCCGGTGAAAGGCACGGTGTTCCACCAGCTCCTGTACTTCAAAAAGCTCTACGACCACCAGACTGCGACGGCGAGAGGCGTGCGGACCTTCCGGCTGCTGGCGCCGGGAAGGGGGACGAGCGAGTTGTACACCACCGACACGCGGAACGTGGAGCACGTGCTGAAGGGGCGGTTCGAGGAGTACTCGAAGGGGAAGTATAATCAGGAGATCGTGAGGGATCTGTTCGGGCAGGGGATCTTCGCGGTGGACGGCGAGAGGTGGAAGCAGCAGAGGAAGCTGGCGAGCTTTGAGTTCTCCACCAGAGTTCTCAGGGATTATAGTTGCTCGGCTTTCAGAACGAACGCCGCGAAACTTGTTCGGCTTGTCAAGGGGTTTTATCAGAACGGCGTCGTTTTTGATATGCAAGATATATTAATGAGATGCACTTTGGACTCCATATTCAAAGTTGGGTTTGGAGTGGAACTGAATTGCTTAGAGGGATCAAGCAAGGAAGGGACTGAATTCATGAAGGCCTTTGATGAGTCAAATGCTTTGGTTTATTGGCGATATGTGGATCCATTCTGGAAGATGAAGAAGTGTCTCAACATTGGTTCTGAAGCAGCCCTCAAGAGGAATGTGAAATTGATTGATGATTTCGTGCATAAGGTTATTCAAACCAGAAGAGAACGTATGGCTGTGCAGCAAGATTATAACGATAAAGAGGACATACTTTCGAGGTTTATGATAGAGAGCAAGAAGGATCCGAAAACGATGACTGATCAATATCTGAGGGACATAATTCTGAACTTCATGATCGCTGGGAAGGACACAAGTGCCAACACTCTCTCATGGTTCTTCTACATGCTCTGCAAGCACCCTCTCGTGCAAGAGAAGATAGCACAAGAGGTGAGAGACGTCACGGGCACCCAGGATATTCATGAGCCCAACGTAGATGAGTTTGTGGCCAATATAACAGAAGCCTCCCTCGAGAAAATGCATTATCTTCATGCAGCACTCTCAGAGACCCTAAGGCTGTACCCTGCTGTTCCTATTGATGGAAGGGCAGCAGAAACAGCAGACATCCTCCCTGATGGCTTCAGAGTGAAGAAAGGCGATGGAGTGTACTACATGGCTTACGCCATGGGCCGCATGCCCTACATTTGGGGCGATGATGCCGACGAGTTTCACCCAGAAAGATGGCTCAAGAATGGCGTCTTTCAGCCTGAATCTCCGTTCAAATTCATAGCTTTTCATGCTGGACCTCGTATCTGCTTAGGGAAGGACTTTGCTTACAGGCAGATGAAGATAGTAGCAATGACTCTTCTTCGCTTCTTCAGATTCAAGTTGGATAGGGAAACAAGGACTGTGACATATAAGACTATGTTTACACTTCACATTGACAATGGCCTCCCTATTTGTGCAATGCCAAGGTCTTGA 1530 0.4895 MDILLWLLTLTSFSILALFLSLAFSLFAGNSIGDPRYAPVKGTVFHQLLYFKKLYDHQTATARGVRTFRLLAPGRGTSELYTTDTRNVEHVLKGRFEEYSKGKYNQEIVRDLFGQGIFAVDGERWKQQRKLASFEFSTRVLRDYSCSAFRTNAAKLVRLVKGFYQNGVVFDMQDILMRCTLDSIFKVGFGVELNCLEGSSKEGTEFMKAFDESNALVYWRYVDPFWKMKKCLNIGSEAALKRNVKLIDDFVHKVIQTRRERMAVQQDYNDKEDILSRFMIESKKDPKTMTDQYLRDIILNFMIAGKDTSANTLSWFFYMLCKHPLVQEKIAQEVRDVTGTQDIHEPNVDEFVANITEASLEKMHYLHAALSETLRLYPAVPIDGRAAETADILPDGFRVKKGDGVYYMAYAMGRMPYIWGDDADEFHPERWLKNGVFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVAMTLLRFFRFKLDRETRTVTYKTMFTLHIDNGLPICAMPRS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0907 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Dere12g0907 509 Gene3D Cytochrome P450 34 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0907 509 Pfam Cytochrome P450 82 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0907 509 PANTHER CYTOCHROME P450 22 501 - -
Dere12g0907 509 SUPERFAMILY Cytochrome P450 35 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0907 509 CDD CYP86A 66 501 - -
Dere12g0907 509 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0907 509 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0907 509 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0907 509 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0907 509 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0907 509 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0907 509 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0907 509 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0907 509 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0907 Dere-ChrDere12 17209417 17215055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0907 11 509 Cytochrome P450 AT2G45510 62.926 0.0 662