Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0906 ATGGAGTCCATGGGTTTTCTCGTGAGCCCCTACTTCTTCGCAGCTTTATCTATAATTTCAACTCTCTGCGTGCTTCAATTTCTCTCCAGAAAGTTGAATAAAAGCCCAGGGAAGAAGTACCCTCCTGTTGCTGGCACCGTCTTCAACCAGCTGCTGAACTTCGATAGGCTCCACCACTACATGACTGATCTTGCAGGGAAGTACAGGACTTACAGGTTGCTCAGCCCTTTTCGCAATGAGATTTATACCGCTGACCCAGCGAATGTCGAGTACATTCTCAAAGCCAATTTCGAGAACTTTGGGAAGGGGTCTCACAACTACCACAACTTGTGGGACTTACTTGGTGATGGGATTTTCACGGTCGATGGTGAAAAATGGCGCGAACAAAGGAAAATATCAAGCCATGAATTCTCAACAAAAATGCTAAGAGAGTTTAGTATTTTAATTTTCAGGAAAAACGCAGCAAAATTAGCAAATATAGTTCTTGAAGCCATAAATTCTAATCAGATATTGGAAATTCAGGACCTACTTATGAAATCAAGTCTGGATTCAATATTCCAAGTTGTATTCGGAACTGAGCTAGACAGCATGTGTGGGTCAAATGAAGCAGGGAAGAAATTCGCTGATGCTTTTGATACTTCAAGTGCATTGACCCTTTGGCGTTATGTTGATGTCTTCTGGAAGTTAAAGAAATTTCTAAATATTGGATCAGAGGCCCAATTAAGGAAGAATACTAAAATTCTGAATGAGTTTGTGTATAAGCTAATCAACACCAGAATTCAGCAGTTGCAGGTGTCAAAGGATGATTCTGCTAATAAAAGAGCTGACATTCTCTCGAGGTTTCTGCAAGGGAATGGATTTGAAACAAAATACCTAAGAGATATCATTCTTAACTTTGTCGTTGCTGGGAAAGACACGACAGCTGCTACACTAGCTTGGTTCATTTACATGCTATGCAAGTATTTGGCCGTACAAGAAAAAGTTGCAAAAGAAGTGAAAGAAGCAACGAACAGAAAAGAAATTACTAGCCCTACAGAGTTTGTGTCTAGCATATCAGACGAAGCTCTTGAAAAGATGAATTATCTCCATGCAGCGATTACTGAAACTCTCAGACTGTATCCTGCAGTTCCAGTGGATGCAAAGATATGCTTTTCTGATGATATATTGCCAGATGGATATAGTGTGAATAAAGGAGATATGGTAGCATACCAACCTTATGCAATGGGTAGGATGAAATTTGTATGGGGAGATGATGCAGAGGAATTTAGACCAGCGAGATGGCTGGACGAGAATGGTATTTTCCGGCCAGAAAGCCCTTTCAAGTTTACAGCTTTCCAGGCTGGTCCACGGATTTGTCTGGGCAAAGAGTTTGCATACAGACAGATGAAGATTTTCTCTGCAGTATTGTTAGGCTGTTTCCGCTTCGAATTGAATGATACTGAGAAAGTTGTCACTTACAAGACAATGATAAATCTTCACATTGATGGAGGTCTTCAAGTCCGAGCCTTCCACAGACACTGGGATTAG 1527 0.41 MESMGFLVSPYFFAALSIISTLCVLQFLSRKLNKSPGKKYPPVAGTVFNQLLNFDRLHHYMTDLAGKYRTYRLLSPFRNEIYTADPANVEYILKANFENFGKGSHNYHNLWDLLGDGIFTVDGEKWREQRKISSHEFSTKMLREFSILIFRKNAAKLANIVLEAINSNQILEIQDLLMKSSLDSIFQVVFGTELDSMCGSNEAGKKFADAFDTSSALTLWRYVDVFWKLKKFLNIGSEAQLRKNTKILNEFVYKLINTRIQQLQVSKDDSANKRADILSRFLQGNGFETKYLRDIILNFVVAGKDTTAATLAWFIYMLCKYLAVQEKVAKEVKEATNRKEITSPTEFVSSISDEALEKMNYLHAAITETLRLYPAVPVDAKICFSDDILPDGYSVNKGDMVAYQPYAMGRMKFVWGDDAEEFRPARWLDENGIFRPESPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFELNDTEKVVTYKTMINLHIDGGLQVRAFHRHWD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0906 508 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 SUPERFAMILY Cytochrome P450 36 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 CDD CYP86A 69 498 - -
Dere12g0906 508 Pfam Cytochrome P450 45 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 Gene3D Cytochrome P450 27 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0906 508 PANTHER CYTOCHROME P450 25 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0906 Dere-ChrDere12 17194368 17198892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0906 4 505 Cytochrome P450 AT2G45510 51.468 0.0 520