Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0903 ATGCCATCACGTCAGCCCCCACCACCTCCGGCGGTGGCGGCGCTACCGACGGCCACCTCGACCCACCCCCACCACCACCATCACCGCCACCAATTACTCCTCGGCGGAGCTCTCGGTCTGGCTTTCGTTCTCCTAATCCTCATCGTCATCCTCACAGTCTTTCTCTACCGCAAACTCTCCTACAACCGCACCGCACCATTTGACCACTACAACCACCACCACCAGCACCGCCGCTTCTCCTACTCTCTCCTCCGACGCGCCACCAACTCTTTCTCACCTTCCACCAAGCTCGGCCATGGTGGGTTCGGCTCCGTTCACAAGGCCACCCTTCCTTCCGGTCAGTCCGTGGCTCTCAAACTCATGGACTCACCTGGGTCGCTACAAGGCGAGCGTGAGTTTCACAACGAGCTTTCACTCTGTTCCCAGCTAAATTCACCTTATATACTCTCTCTTCTGGGTTTTTCTTCTGATCGCCGAGGCCGTAAACTGATTTTGGTTTATGAGCTCATGCCGAACCGCAGTCTGCAAGATGCGTTGTTAGATAGGAAGTGCGAGGAGCTCATGGAGTGGAAGAAGAGGTTCGATATTGCTGTTCACATCTCGAAGGGTCTTGAGTACCTTCACCACTATTGCAGCCCGCCCCTGATTCACGGGGATATCAAGCCGAGTAACGTGTTGCTGGATGTCGATTTTTCGGCGAAAATTGGGGATTTCGGGCTTGCTAGGTTGAAAACAGAGGATCTGGAAATGGTGGAGGAAAATGGGGGAGAGGAAGAGAGCGCGAAGAAGAAGGGTGGGGTTGTGGACTTGGGGGATGACCATGGGTCGATTTTGGAAGAGGCGGAGAGTATCACCACTGGATTTGAAGAAGGTAGTGGAGTGGTCGATCGGTCGCCCGAGAGTTGCATGGTTAGGATTTTAGATTCAGAAGCTTCTCCAGAGACGACGGTCGCGCTGTCACCGGAAGTGGGGGTTGATAAATCTAGCGTATCAGAAGGCTGCTTTGATAAATTTAGCATTGATAGTGGGAAAGATTTGATCGGGAATAATCGGAAAAAGGGTGGTTCGGGCAGGGATTGGTGGTGGAAGCAGGACCAAGGAGGAGGGTCAGAATCGGGTAGGGTGAAAGACTATGTGATGGAGTGGATCGGGAGTGAGATAAAGAAGGAGAGACCTAAGAGCGAATGGATTGCCTCTCCAAGCACGGCGGGGACTAGCACTCCGGCCCCGAAAATCGAGTCAAAGAAGCAGAGGAAGAGATTGGATTGGTGGGCATCATTGGATGAAGAAAAAGTCAAGAAGAAGGAGAAGAACCGAAAACCCAGAGAATGGTGGAAGGAGGAGTTCTGTGAGGAGCTCACGAAGAAGAAGAAAAAAAGAAGTCTTGATTCGAATTACGCTGGGGATTCGTGGTGGCAGAAAGACGAGGACATGGTACCAGAGAAGAAGAAGAAGAAGAGAAAAAACAAGAGTAGCAGAGGAAGCATTGATTGGTGGTTGGATGGTTTGAGTGGTGAGCTCAGAAATGGCAGAAGAAGTAGCCAGGATTGGGTTAGTGGGGATATACCCAAGAGTGGTGGAATTAGCAGCACACCAAGTATGAGAGGAACTGTTTGTTATATTGCTCCTGAGTATGGCGGTGGTGGCCAGCTTTCTGAGAAGTGTGATGTCTATAGTTTTGGTGTTCTACTCTTGGTTTTGATCGCTGGGAGGCGACCTCTTCAAGTAACGGCATCACCAATGTCAGAATTCGAAAGGGCTAATCTCATTTCGTGGGCTCGGCAACTTGCCCACAATGGGAGGCTTTTGGATCTTGTTGACCCTTCCATTCATTCATTAGACAAGGAGCAGGCATTGCTCTGCATCACAGTTGCCTTGTTATGTCTACAGAGATCGCCAGCGAAGCGACCTACCATGAAAGAGATTGTAGGCATGCTTTCTGGTGAGGCTGAGCCACCCCACTTGCCTTTTGAGTTTTCACCTTCACCGCCATCTAATTTTCCGTTCAAGTCCCGAAAGAAGGCTCGGTGA 2031 0.5101 MPSRQPPPPPAVAALPTATSTHPHHHHHRHQLLLGGALGLAFVLLILIVILTVFLYRKLSYNRTAPFDHYNHHHQHRRFSYSLLRRATNSFSPSTKLGHGGFGSVHKATLPSGQSVALKLMDSPGSLQGEREFHNELSLCSQLNSPYILSLLGFSSDRRGRKLILVYELMPNRSLQDALLDRKCEELMEWKKRFDIAVHISKGLEYLHHYCSPPLIHGDIKPSNVLLDVDFSAKIGDFGLARLKTEDLEMVEENGGEEESAKKKGGVVDLGDDHGSILEEAESITTGFEEGSGVVDRSPESCMVRILDSEASPETTVALSPEVGVDKSSVSEGCFDKFSIDSGKDLIGNNRKKGGSGRDWWWKQDQGGGSESGRVKDYVMEWIGSEIKKERPKSEWIASPSTAGTSTPAPKIESKKQRKRLDWWASLDEEKVKKKEKNRKPREWWKEEFCEELTKKKKKRSLDSNYAGDSWWQKDEDMVPEKKKKKRKNKSSRGSIDWWLDGLSGELRNGRRSSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLIAGRRPLQVTASPMSEFERANLISWARQLAHNGRLLDLVDPSIHSLDKEQALLCITVALLCLQRSPAKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFPFKSRKKAR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0903 676 FunFam Os07g0541700 protein 170 255 - -
Dere12g0903 676 Gene3D Phosphorylase Kinase; domain 1 62 169 - -
Dere12g0903 676 Gene3D Transferase(Phosphotransferase) domain 1 503 652 - -
Dere12g0903 676 Gene3D Transferase(Phosphotransferase) domain 1 170 269 - -
Dere12g0903 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Dere12g0903 676 MobiDBLite consensus disorder prediction 1 26 - -
Dere12g0903 676 ProSitePatterns Protein kinases ATP-binding region signature. 97 119 IPR017441 GO:0005524
Dere12g0903 676 SMART serkin_6 91 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0903 676 MobiDBLite consensus disorder prediction 654 676 - -
Dere12g0903 676 SUPERFAMILY Protein kinase-like (PK-like) 66 665 IPR011009 -
Dere12g0903 676 ProSiteProfiles Protein kinase domain profile. 91 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0903 676 MobiDBLite consensus disorder prediction 346 372 - -
Dere12g0903 676 PANTHER OS07G0586332 PROTEIN 1 676 IPR044576 -
Dere12g0903 676 Pfam Protein kinase domain 531 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0903 676 Pfam Protein kinase domain 94 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0903 676 MobiDBLite consensus disorder prediction 390 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0903 Dere-ChrDere12 17081826 17083856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0903 524 646 Receptor kinase-like Gene Family AT3G58690 36.434 5.80e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Dere12g0903 Pkinase 1.4e-26 CL0016