Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0873 ATGGGGTCTGATGGTCTGATGTCAGATGAATTGGGCCAGTGCATCGTACCAGTTCCTGGTATCATAGTCTTGGTTGTGGATGGAGATTCAGCTTGTCTAGCAGTTGTATCAAAAATTCTCCATACCCTTGGATATGAAGTTGTAACTGCTACACTAGGCTCCGATGCATTATCCATTGTTCAGGAGAAGAAGAACAAGCTTCATCTTGTGCTCATGGAGGTTCATTTGCCTGACATGGGAAGATATGAGATCATCAAGAAAATGAGAGAACAATTCAAATTACCGTTGCTCGATTCAACAGTGGGTGCACCAGCTGAAGGGGCTGAACATTATTTCATAAAGCCCGTTATGGTTGCTGATTTAAGGGTGCTGTGGCAGTTTGCAAGGAGAGAGAGAACTGATAAAGTAATAGATAGTGATGTAGTTTGTGGCCTGATGGGGGATAAATCAGAGAAATATCGAGTCATTTTGAAACAACAAGAGACAGCAATCAAGAATTCATCTAATTTACATCAGGGATCGGGCCATCTGACTCAGACAAACAATCTGCGAGGAACATGCCTTTCATTCTTGGAACGGCAACATGTGACCCATCAACCAGACTCCAGCAGCAACTGTCAGAAGGATCTTGGTAGTTTTACATCCAAGCATTGTTCCAGTCCTGCACATTTTCCTTCCTGTGAAATTTTGACTGGTCAGGATTTAAATTCTGGGCAAAACCAATTATTTTCATCATGTAATCCACAAGGCACTTTCGAGCCTACTAATCCTGCCTTCTGA 780 0.4256 MGSDGLMSDELGQCIVPVPGIIVLVVDGDSACLAVVSKILHTLGYEVVTATLGSDALSIVQEKKNKLHLVLMEVHLPDMGRYEIIKKMREQFKLPLLDSTVGAPAEGAEHYFIKPVMVADLRVLWQFARRERTDKVIDSDVVCGLMGDKSEKYRVILKQQETAIKNSSNLHQGSGHLTQTNNLRGTCLSFLERQHVTHQPDSSSNCQKDLGSFTSKHCSSPAHFPSCEILTGQDLNSGQNQLFSSCNPQGTFEPTNPAF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0873 259 Gene3D - 22 139 - -
Dere12g0873 259 Pfam Response regulator receiver domain 23 95 IPR001789 GO:0000160
Dere12g0873 259 SUPERFAMILY CheY-like 20 131 IPR011006 -
Dere12g0873 259 ProSiteProfiles Response regulatory domain profile. 22 129 IPR001789 GO:0000160
Dere12g0873 259 SMART REC_2 21 125 IPR001789 GO:0000160
Dere12g0873 259 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 202 IPR045279 GO:0009736
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0873 17 176 Response Regulator Gene Family AT4G16110 28.994 1.40e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere12g0873 Response_reg 1.4e-08 CL0304