Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0864 ATGAGACTCTCTCTACTCTACCAACCTTCTTGGTTGAAAAGTAAAGTTAGAGATTTCTTTCCCACTTTACCATTATACCCTCACAACACGGCACTACATGACGGTCTCTATGCCTTACATTTCAAGGCAATTGAGAAGACTCGTGGACATCCTCAGCTCTGGTTTTCCAAATCGCCTTATCTATCAACAGCCATGGTGGTTGAAGATAATAATCATGACGGTCGTTCAATAGAAGAATGGCTGATTCAAGCCCAAGAATTTGTTCCTCTTGCTCTTCATAAGGCAAAAGAGGTGAAGAATTTCCCAGGAAGGTGGAAGATGATCATATCAAAACTAGAACAGATCCCATGTCGTCTATCAGACTTATCTAGCCACCCTTGCTTCTCCAAGAACGCTCTATGCAAGGAACAATTGCAGGCTGTGTCAACAGTTCTCCAAGAAGCCATTGATTTGGCCGAGCTTTGCATGAAGGAGAAGTATGAAGGAAAGCTCCGGATGCAGAGCGATCTCGATGCCTTATCAGGAAAACTTGATTTGAACTTGAAAGATTGCAGCCTGCTGATCAAAACTGGAGTTTTGGGTGAGGCCACTTTGCCATTAGTAGTGTCAGAAGCAGATGTTTCAAGCAATATTAGGGAGTTACTCGCTCGCCTTCAGATCGGTCACTTAGAGGCCAAACACAAGGCTATAGATAGACTAGATGATGTAATGAAAGAAGATGAGAAGAGTGTTTTAACTGTTTTAACTCGTAGCAACATAGCTGCTTTGGTTCAATTGCTCACTGCTACTTCTCCAAGGATAAGAGAGAAAACTGTCACTATTATATGCTGTCTTGCAGAATCAGGAAGCTGCGAGAATTGGCTAGTTTCTGAAGGGGTTATCCCACCTCTGATAAGGCTCATTGAATCTGGAAGTGCCATCGGTAAAGAGAAGGCTGCTATAACCTTCCAGAGGCTCTCCATGTCATCAGAAACTGCCCGTGCCATCGTAGGACATGGTGGGATTCGTCCACTCATTGATCTATGTCAGACCGGTGACTCTGTGTCACAAGCTGCATGTGCTTGTACTTTGAAGAACATATCTGCTGTCCCTGAGGTTCGACAAGTTCTAGCTGAGGAAGGGATTGTTAAGGTAATGATCAGTCTCCTAAACTGTGGAATCTTGTTGAATTCCAAAGAGTATGCAGCTGAGTGCCTACAGAATCTCACTTCAAGCAATGAGAATCTAAGAAGGCTTGTCATACAAGAAAATGGAATAAGGAGCCTTTTAGCTTATCTAGATGTTCCACTTCCACAAGAACCCTCAGTGGGAGCACTGAGGAACTTGGTGGGATCTGTCTCTGAGCAATCTTTAGTTTCTATGGGGCTCCTTCCCCGCTTGGCCCACGTTCTAAAATCCGGGTCTATCGGGGCTCAACAAGTGGCTGCTTCTGCAATCTGCAAAATTTGCAGCTCAGGAGAGATGAAGAAGATGGTTGGTGAAGCTGGTTGTATCCCTCTGCTTGTGAAAATGCTGGAGGCCAAGTCAAATGGTGCTAGAGAGGTCGCTGCGCAAGCAATTTCGAGCTTGATGGCGCTGTCTCAGAATCAAAGAGAGGTGAAGAAGAATGACAAGAGTGTGCCCAATCTTGTTCAGTTGCTTGATCCTAGCCCTCAGAACACTGCAAAGAAATATGCTGTTTTGTGCCTGGGATCGCTTTCTTCAAGTCAAAAGTGCAGGAAGTTGATGATTTCTTATGGGGCAATTGGGTATCTGAAGAAGCTCAGAGAGATGGAGATTCCGGGAGCTAAAAAGCTACTTGAGAGATTGGAAAGAGGGAAACTGAGAAGCTTGTTTAGCAGGAAATAG 1848 0.4453 MRLSLLYQPSWLKSKVRDFFPTLPLYPHNTALHDGLYALHFKAIEKTRGHPQLWFSKSPYLSTAMVVEDNNHDGRSIEEWLIQAQEFVPLALHKAKEVKNFPGRWKMIISKLEQIPCRLSDLSSHPCFSKNALCKEQLQAVSTVLQEAIDLAELCMKEKYEGKLRMQSDLDALSGKLDLNLKDCSLLIKTGVLGEATLPLVVSEADVSSNIRELLARLQIGHLEAKHKAIDRLDDVMKEDEKSVLTVLTRSNIAALVQLLTATSPRIREKTVTIICCLAESGSCENWLVSEGVIPPLIRLIESGSAIGKEKAAITFQRLSMSSETARAIVGHGGIRPLIDLCQTGDSVSQAACACTLKNISAVPEVRQVLAEEGIVKVMISLLNCGILLNSKEYAAECLQNLTSSNENLRRLVIQENGIRSLLAYLDVPLPQEPSVGALRNLVGSVSEQSLVSMGLLPRLAHVLKSGSIGAQQVAASAICKICSSGEMKKMVGEAGCIPLLVKMLEAKSNGAREVAAQAISSLMALSQNQREVKKNDKSVPNLVQLLDPSPQNTAKKYAVLCLGSLSSSQKCRKLMISYGAIGYLKKLREMEIPGAKKLLERLERGKLRSLFSRK 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0864 615 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 72 613 - -
Dere12g0864 615 Pfam Armadillo/beta-catenin-like repeat 323 362 IPR000225 GO:0005515
Dere12g0864 615 Pfam Armadillo/beta-catenin-like repeat 487 524 IPR000225 GO:0005515
Dere12g0864 615 Gene3D - 200 448 IPR011989 -
Dere12g0864 615 SUPERFAMILY ARM repeat 211 588 IPR016024 -
Dere12g0864 615 SMART arm_5 526 568 IPR000225 GO:0005515
Dere12g0864 615 SMART arm_5 322 362 IPR000225 GO:0005515
Dere12g0864 615 SMART arm_5 363 404 IPR000225 GO:0005515
Dere12g0864 615 SMART arm_5 445 484 IPR000225 GO:0005515
Dere12g0864 615 SMART arm_5 405 444 IPR000225 GO:0005515
Dere12g0864 615 SMART arm_5 240 280 IPR000225 GO:0005515
Dere12g0864 615 SMART arm_5 485 525 IPR000225 GO:0005515
Dere12g0864 615 Gene3D - 449 592 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0864 Dere-ChrDere12 16327007 16329289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0864 455 588 U-box Gene Family AT2G23140 29.630 1.45e-06 49.3