Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0816 ATGTGTAAGGAAAAAGATGTCTTTCCTATATCTGAGTTTGGGATAAAGCCCAGTAAACATCCAAGTGAATTTTTCTATAAAGCATTGACTGCTATTGACACAAGCACGCACAGTGGCTTTTCAATACCTCGCAGGGCTGCAGAGAAGCTCTTTCCTCTCTTGTTAGAGATGCCCCTTGCCAAACAAACACCACCTATGACTCAACTCATTGCACAGTTAGCAGGGGAAAATGCAAAATTGGACAATAGATTTCCCCAAGTGGCAGAACTTAGTTTAGTTTGGTGGCTTGAAGTGAAGGGAAGGTTGGAGACTAAAATGCTGTCCCCAAGAGCACCATATTCTGTGTGCTTCGTCTTTAAGTTCCGAGAGAGAAATTATGGTTTCAAAAATAGATCTATGGAGTTGAGCGTGAAATGTGAAGGAAGCATAGATGGACGTCGCAGAAGAGTAATTTTAGACCCTCCAGGAGATGATGTTCGACAGAGAGAAGATGGATGGATGGAAGTTGAGATGGGGGACTTCTTCAATGAGAACGATGATGATGTAGTGGAGTATAAACTATGGGAGACTAGTAACTATTATCCTAAAGAAGTCCTTGTAGTTGAAGGAGTTGAGTTTAGACCTAAAAGAAATGAATAG 639 0.4131 MCKEKDVFPISEFGIKPSKHPSEFFYKALTAIDTSTHSGFSIPRRAAEKLFPLLLEMPLAKQTPPMTQLIAQLAGENAKLDNRFPQVAELSLVWWLEVKGRLETKMLSPRAPYSVCFVFKFRERNYGFKNRSMELSVKCEGSIDGRRRRVILDPPGDDVRQREDGWMEVEMGDFFNENDDDVVEYKLWETSNYYPKEVLVVEGVEFRPKRNE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0816 212 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 81 208 - -
Dere12g0816 212 Pfam Phloem protein 2 81 208 IPR025886 -
Dere12g0816 212 Gene3D - 23 85 IPR015300 -
Dere12g0816 212 SUPERFAMILY DNA-binding pseudobarrel domain 14 73 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0816 Dere-ChrDere12 15425997 15427946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0816 4 77 B3 DNA Binding Superfamily AT1G19850 56.579 6.59e-19 82.8