Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0786 ATGGACTGTGGGTCCAGCAAGAGTAACAAGGTTCATCTTGGTGAGGGTGATGAGGGTGGAGATCATGTCCATGGCCAGAGAGGAGGGGGAGGAGGAGGGCCTTGTGGGGCGTGCAAGTTCCTTCGGCGAAAGTGCGTGAGGGGATGCGTATTTGCACCATACTTCCACTCCGACCAGGGCTCCGCCCACTTCGCGGCGGTGCACAAGGTGTTCGGAGCCAGCAACGCCGCCAAGCTCCTTCTCCGAATCCCTCCTCACCACCGTCTCGACGCCGTCCTCACTCTCTCCTACGAGGCTCTCTCCAGAGCTCGCGACCCCGTCTATGGCTGCGTCGCCCACATATTTGCTCTTCAACAACAGGTAGTGAACTTGCAGGCAGAGTTAGCTTATGTTCAAGCTCGTCTTTCCACACTGCAACGTCTACCTGCAGTTCCACCTCTTCCTCCGCCTCAAACTTCATCGTCGTCTTCATCCTCAACCTTGCCATATTCCAACACTGACTTCCTCTTTGATCCTCTTCAACAACCTCATACATCTAATTCACTAGAATCATGCAGTTTTCTGAACCACCTTTCCGATCAACAAGATCTGCTACTACATGATGGGGATCTCCAAGCTTTGGCTAGAGAATTTGTGGCGAGGTACTTGCCTGGATTTTCTGTGCAACTGACTAGTTCCGGTTATGCTCTTGTGGTTATGGTATCTTCAGTAAACTTCAGTGCAAAGCCAAAGTGTACCTTGTGGTCAAAAGCTCAATTAATTCCCTAA 768 0.5156 MDCGSSKSNKVHLGEGDEGGDHVHGQRGGGGGGPCGACKFLRRKCVRGCVFAPYFHSDQGSAHFAAVHKVFGASNAAKLLLRIPPHHRLDAVLTLSYEALSRARDPVYGCVAHIFALQQQVVNLQAELAYVQARLSTLQRLPAVPPLPPPQTSSSSSSSTLPYSNTDFLFDPLQQPHTSNSLESCSFLNHLSDQQDLLLHDGDLQALAREFVARYLPGFSVQLTSSGYALVVMVSSVNFSAKPKCTLWSKAQLIP 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0786 255 MobiDBLite consensus disorder prediction 1 31 - -
Dere12g0786 255 Pfam Lateral organ boundaries (LOB) domain 34 132 IPR004883 -
Dere12g0786 255 ProSiteProfiles LOB domain profile. 33 135 IPR004883 -
Dere12g0786 255 PANTHER LOB DOMAIN CONTAINING PROTEIN 32 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0786 Dere-ChrDere12 15026095 15030733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0786 30 218 AS2 family AT4G00210 51.152 2.00e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere12g0786 LOB 1.8e-35 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0786 12 15026095 15030733 Dere12g0786 12 15026095 15030733 ECH