Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0785 ATGAGCATCAACTCCAGTTCTAGCGCCGGCGGTAGCAGTAGTGGTGGTGGCGGTGGTGGTGGTGGCTGCGGCAGTGGTGGCGGAGGCCCTTGCGGTGCCTGCAAGTTCTTGCGACGGAAGTGCGTGCCGGGGTGCATCTTCGCGCCGTACTTCGACTCGGAGCAAGGCGCGACTCACTTCGCGGCGGTGCACAAGGTGTTCGGAGCCAGCAACGTGTCCAAGCTGCTTCTCAACATTCCGGTGCACAAGCGGCTGGACGCCGTCGTCACCATTTGCTTCGAGGCTCAGGCGAGGCTCAGAGACCCCGTGTATGGCTGCGTGGCCAACATCTTCGCCCTCCAGCAACAGGTGGTGAGTTTACAAGCAGAGCTATCATACTTGCAAGGGCAGTTTGGCACATTAGAGATGCCTCAACCTCAAGCATTAATGGCGGGACCCACAGCAATTTCACTTGGCAACGCCAACATCATCTCCTCGGGGTCACCCTCCTACGATCTCTCTTCACTCTTCGATCCCATGGCCCAAACTTCATGGGCCACGCAACAGCGGCCCATGGACTTGCGTCAACATGGACCTCCAGGCCCATCTAGTGGCGGCGGCGATCTTCATGAACTGGCAAGAGAGCTCCTCAATAGAAATCCCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCACACTCGGCTCCCATGGCTTGCTCTAAAGCCTCCTCGTCATCTCCTTCGCTTTTTAAATCTTGA 744 0.5806 MSINSSSSAGGSSSGGGGGGGGCGSGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICFEAQARLRDPVYGCVANIFALQQQVVSLQAELSYLQGQFGTLEMPQPQALMAGPTAISLGNANIISSGSPSYDLSSLFDPMAQTSWATQQRPMDLRQHGPPGPSSGGGDLHELARELLNRNPSPPPPPPPPPLPPHSAPMACSKASSSSPSLFKS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0785 247 PANTHER LOB DOMAIN CONTAINING PROTEIN 27 137 - -
Dere12g0785 247 MobiDBLite consensus disorder prediction 212 230 - -
Dere12g0785 247 MobiDBLite consensus disorder prediction 185 247 - -
Dere12g0785 247 Pfam Lateral organ boundaries (LOB) domain 30 128 IPR004883 -
Dere12g0785 247 ProSiteProfiles LOB domain profile. 29 131 IPR004883 -
Dere12g0785 247 MobiDBLite consensus disorder prediction 233 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0785 Dere-ChrDere12 15001160 15005342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0785 32 221 AS2 family AT4G00220 61.692 1.02e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere12g0785 LOB 1.7e-37 No_clan