LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere12g0771	ATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGGGTGTTAGAGTTTTCTTCTTCTTTGTTTGCTTCTTCAGATTCGTTTCCTTTGCTTCTTCCGCATCAACCACCACAAAAGTGGACCTGCGACGACGAAATTTGCTATGCGGGCATTGAGCCCACCTCTGTTCTTGACGCCAGAAGAAGCCCAAGCCCTCCTACATCTTCCTCAACAATGGCCTCCCATGGCAGCAACAGCGCCGCCAGCAAGGGCGGCGACGGTAGTTGTTCGACCAATAGCACCACCACCGGTGCCACGGCGACGGTCTCGGAAAATCCATCTCAAGCAGTCTTAGACACGTCCAGCGCAGAGAAATGTGGGCTGCGGATGGAGGATTGGGAGGGTGTCTTGTCTGAGTCCCCAGGTCAAGATCAGTCTGTTCTAAGATTAATTATGGGTGATATGGAAGACCCATCTGCAGGATTGAACAATCTTTTGCAGAGCAGTGGTGTTGGGTCTCAAATGGTTGATTTCAATGGAGGTTTCGGGGTTGTGGATCAAGGGTTTGAGCTTGAACCCGTTACTTGTGGGAATATAATGAGTAATATTACTGAACCCATTTTCTCTGCTTCTGCTAGCAATCCTCTAATGGTGTCATCTTCTCCGTTGGTCTTTAATTCTCAGCAGCAGCAGGTAATTTCAACGGTGGAAGAGAAGTTAAACCGAAACCAAGCTCATTTCTCAGAGAACCCATCTTTCTTTATGCCCTTGACATACCCACAATTGCATGAGCAGCAAGTTTTCTCTCAGCCTCAAGCGAAGCGCCTTCTTTGTGACACAATTGGGCAAAGTTATCAGGTCCCAAAGTCACCCCTCCTGGATTCTGGGCAAGAGCTATTTGCTAGGAGGCAGCAACAGCAGCTTCCTTCACATCCTCAACATCTGCAGCAATGGCAATCCTTGCTTGAGCCACCGGTGAAACAGCAGAAGGTGAGCTCCGCCGGGGATGATTTCATGACCCACCAGCTTCAGCAGACTATAATTGACCAGATTTTCAAGGCTGCAGAGCTTATTGAAGCTGCTAACCCAGTACATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTATTGGTAAGCCATTTCAGAGGGCTGCTTTCTATATGAAGGAAGCCTTGCAATTACTGCTACATTCAAATGGGCAAAGTTTATTGGCTTTCTCGCCCATCAGTTTCATATTCAAAATTGGAGCTTATAAATCGTTTTCTGAGATATCTCCAATTCTTCAATTTGCCAATTTTACTTGTAATCAAGCCCTTATTGAAGCTGTTGAAAGGTTTGATCGGATTCACATTTTTGATTTTGATATTGGATTTGGAGTGCAATGGGCTTCTTTTATGCAAGAGCTGGCCTTGAGAAATGGTAGTGCACCTTCACTTAAAGTTACTGCTGTTGTATCACAATCCACCTGTGATGAAGTTGAGCTCAGTTTTACTCGAGAGAGCTTGAAACAATATGCCAAAGAAATCAATATGTCATTTGAGCTCAATTTTATGAATATTGAATTGTTAGATTCTGCTTCCTGGCCCCTGCCTGGTCGTTTTACTGACACTGAAGCAATTGCAGTGAATTTGCCAGTTTCTTGTTTCTCAAATTACCCATCATCCTTTCCTTTGGCCCTCCGCTTTGTAAAGCAGCTCATGCCAAAAATTGTGGTCACTTTGGATAGAAATTGTGATCGAATTGATGTATCATTCCCCCACAATTTAATCCATGCACTTCAATCCTACTCTGCCTTGCTTGAATCACTGGATGCTGTGAATGTGAACCTAGATGTCCTTCAAAAGATAGAGAGGCACTTTGTCCAGCCGGCCATTGAGAAGATCATACTGGGTCGCCACCATTCTAGAGAAAAGTTACCTCCATGGAAGAACCTGTTTCTTTCTTCTGGATTCTCTCCTTTCACATTTAGTAACTCTACAGAAGCTCAAGCAGAGTGCTTGGTGCAGAGGGCCCCTGTGAGGGGATTTCAAGTGGATAGGAAGCACTCTTCTCTTACTCTATGCTGGCAGCGGAAGGAACTCGTCTCAATTTCGACTTGGAGATGCTGA	2103	0.456	MKAMPLPFEEFQGKGVLEFSSSLFASSDSFPLLLPHQPPQKWTCDDEICYAGIEPTSVLDARRSPSPPTSSSTMASHGSNSAASKGGDGSCSTNSTTTGATATVSENPSQAVLDTSSAEKCGLRMEDWEGVLSESPGQDQSVLRLIMGDMEDPSAGLNNLLQSSGVGSQMVDFNGGFGVVDQGFELEPVTCGNIMSNITEPIFSASASNPLMVSSSPLVFNSQQQQVISTVEEKLNRNQAHFSENPSFFMPLTYPQLHEQQVFSQPQAKRLLCDTIGQSYQVPKSPLLDSGQELFARRQQQQLPSHPQHLQQWQSLLEPPVKQQKVSSAGDDFMTHQLQQTIIDQIFKAAELIEAANPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALQLLLHSNGQSLLAFSPISFIFKIGAYKSFSEISPILQFANFTCNQALIEAVERFDRIHIFDFDIGFGVQWASFMQELALRNGSAPSLKVTAVVSQSTCDEVELSFTRESLKQYAKEINMSFELNFMNIELLDSASWPLPGRFTDTEAIAVNLPVSCFSNYPSSFPLALRFVKQLMPKIVVTLDRNCDRIDVSFPHNLIHALQSYSALLESLDAVNVNLDVLQKIERHFVQPAIEKIILGRHHSREKLPPWKNLFLSSGFSPFTFSNSTEAQAECLVQRAPVRGFQVDRKHSSLTLCWQRKELVSISTWRC	700

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere12g0771	700	ProSiteProfiles	GRAS family profile.	333	699	IPR005202	-
	Dere12g0771	700	Pfam	GRAS domain family	343	699	IPR005202	-
	Dere12g0771	700	MobiDBLite	consensus disorder prediction	62	116	-	-
	Dere12g0771	700	PANTHER	OSJNBA0084A10.13 PROTEIN-RELATED	302	694	IPR005202	-
	Dere12g0771	700	MobiDBLite	consensus disorder prediction	59	116	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere12g0771	Dere-ChrDere12	14786567	14788669	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere12g0771	342	700	GRAS Transcription Factor Family	AT4G00150	56.906	2.34e-134	405

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRAS	Dere12g0771		GRAS	6.7e-89	CL0063